Gene Information

Name : Lcho_2139 (Lcho_2139)
Accession : YP_001791171.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 2342456 - 2343211 bp
Length : 756 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_2327 ABC transporter related

DNA sequence :
ATGACCGTCCCGATCATCACCTTCGAGCGCGTCAACAAGTGGTACGGCGACGCCTTCCACGTGCTGCGCGACATCGATCT
CAGCGTGCGCCGCGGCGAGCGCATCGTGATCTGCGGCCCGTCGGGTTCGGGCAAGTCGACGCTGATCCGCTGCATCAACG
CGCTGGAGCCGTATCAGGAAGGCCGCATCGGGGTCGACGGCACCCCGCTCGGCATCGAGGGCCGCGAGGACGACCGCGCG
GTGCAGGCCGTGCGCCGCCAGGTCGGCATGGTGTTCCAGCAGTTCAACCTGTTCCCGCATCTGACGGTGCTGCAGAACCT
GACGCTCGCACCGCTGCACGTGAGCCGCGAGCCCAAGCGCGAAGCCGAGGCCCGCGCGATGGCGCAGCTCGAACGGGTGC
ACATCGCCGAGCAGGCGCACAAGTTTCCGCTCCAGCTCTCGGGCGGCCAGCAGCAGCGGGTGGCGATCGCCCGCGCGCTG
TGCCTGGCGCCCAAGATCATGCTCTTCGACGAGCCCACCTCGGCGCTCGACCCCGAGATGATCCGCGAGGTGCTCGACGT
CATGATCGAGCTCGCTGGCCAGGGCATGACGATGGTCTGCGTCACGCACGAGATGGGTTTTGCCAAGTCGGTGGCCGACC
GGGTGGTGTTCATGGACCAGGGCCAGATTGTCGAGGCGGCGCCGCCGGCGGAGTTCTTCAATGCGCCGCGCAGCGAGCGG
ACACGCAGTTTCCTGGAGCAGGTGCTGGCGCATTGA

Protein sequence :
MTVPIITFERVNKWYGDAFHVLRDIDLSVRRGERIVICGPSGSGKSTLIRCINALEPYQEGRIGVDGTPLGIEGREDDRA
VQAVRRQVGMVFQQFNLFPHLTVLQNLTLAPLHVSREPKREAEARAMAQLERVHIAEQAHKFPLQLSGGQQQRVAIARAL
CLAPKIMLFDEPTSALDPEMIREVLDVMIELAGQGMTMVCVTHEMGFAKSVADRVVFMDQGQIVEAAPPAEFFNAPRSER
TRSFLEQVLAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-26 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-26 41