Gene Information

Name : Lcho_2067 (Lcho_2067)
Accession : YP_001791099.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : short chain dehydrogenase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2246217 - 2246999 bp
Length : 783 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mpt:Mpe_A1448 short chain dehydrogenase

DNA sequence :
ATGAGCTATCGCATTGACCTGTCGGGCCGCGTGGCCCTGGTCACCGGAGCGTCCAGCGGCCTGGGCGCGCAGTTCGCCCG
CACGCTGGCCAAGGCCGGTGCCGCGGTGGTGCTGGCCGGGCGCCGGACCGATCGCCTGAAAGAGCTGCGTGCCGAGATCG
AGTCGCACGACGGCGACGCCCATGTGGTCGAGCTCGACGTCACCGACATCGACAGCATCAAGTCGGCCGTGGCGCATGCC
GAGACCGAAGTCGGCACGCTCGACATCCTGATCAACAACTCGGGCGTCAGCACCACGCAGAAGCTGGTCGACGTGACGGC
CGACGACTACGATTTCATCTTCGACACCAACGTGCGCGGCGCGTTCTTCGTGGCGCAGGAAGTCGGCAAGCGCATGGTGG
CGCGCGCGGTCGGCGCGGCGCCGGGCACCTACATCGGCGGGCGCATCGTCAACATCGCCTCGATGGCCGGCCTGCGGGTG
CTCAGCCAGATCGGCGTCTACTCGATGAGCAAGGCCTCGGTGATCCACATGACGCGGGCGATGGCGCTCGAGTGGGGCAA
GTACGGCATCAACGTCAACGCCATCTGCCCGGGCTACATCGACACCGAGATCAACCACCACCACTGGGAAACCGACGGCG
GCCAGAAACTGGTGCAGATGCTGCCGCGCAAGCGCCTGGGCAAGCCCGAAGACCTCGACACCAGCCTGCTGATGCTGTGC
GCCAACGAGAGCCACTTCATCAACGGCGCGGTGATCCAGGCCGACGACGGCTTCGGCATCTGA

Protein sequence :
MSYRIDLSGRVALVTGASSGLGAQFARTLAKAGAAVVLAGRRTDRLKELRAEIESHDGDAHVVELDVTDIDSIKSAVAHA
ETEVGTLDILINNSGVSTTQKLVDVTADDYDFIFDTNVRGAFFVAQEVGKRMVARAVGAAPGTYIGGRIVNIASMAGLRV
LSQIGVYSMSKASVIHMTRAMALEWGKYGINVNAICPGYIDTEINHHHWETDGGQKLVQMLPRKRLGKPEDLDTSLLMLC
ANESHFINGAVIQADDGFGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 6e-27 43