Gene Information

Name : Lcho_2034 (Lcho_2034)
Accession : YP_001791066.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : muramoyltetrapeptide carboxypeptidase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1619
EC number : 3.4.17.13
Position : 2210149 - 2211075 bp
Length : 927 bp
Strand : -
Note : PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: mpt:Mpe_A1749 muramoyltetrapeptide carboxypeptidase

DNA sequence :
ATGACTGAAGCATTCGCCCACGACCTGGGTACCCTGCACCTCTACAGCCCGTCGGGCGTGGTGATGGCGGCGCCCGCCCT
GCGGCGCGCGGCCAAGCGGCTGCAGGCCTACGGCTTCGAGGTGTCGATCGACGCCGACGCGCTGGCCCGCCACCAGCGTT
TTGCCGGCGACGACGACCTGCGCCTGGCCGCCTTGCACCGCGTGGCCGAGGCCGCCCCCACGGTGGCGCTGGCCACGCGC
GGCGGTTACGGCCTGACGCGGCTGCTCGACCGCATCGACTGGCCGCTGCTGGCGCGTGCGGTGGCGCGCGGCACGCACTG
GGTCGGCTACAGCGACCAGACGGCGCTGCACCTGGGCCTGCTGGCGCACACCAAGGCGCCGAGCTGGCACGGCCCGCTGG
CGGTCGACGACTTCGGCCGCAGCGTGGCCGAGGGCGGGCTCGACGAGGTGACGCCCGACTGCTTCATCGAGGCGGTCAGC
GGCGAGCTGGAGGCGGTGGGTTTCCGTACCGAAGAAGGTCACGACGGCCTCGACGTCAAGGGCCTGCTGTGGGGCGGCAA
CCTGACGGTGCTGTGCTCGCTGCTGGGCACGCCGCACTGGCCGAAGGTCAAGGGCGGCATCCTGTTCCTCGAAGACATCA
ACGAGCACCCGTACCGGGTCGAACGCATGCTGATGCAGCTGCAGCAGGCCGGCGTGCTGGCGGCGCAGAAGGCGGTGCTG
CTGGGCGATTTCGGCGGCTGGCGCAAGAGCCCGCTCGACCGCGGCTACAACGTCAAGTCGATGGTCGCGCAGGTGCGGGC
GATGACCTCCACCCCGGTGCTGACCGGCCTGCCGATCGGCCATGTGCCGACCAAGGTGACGCTGCCGGTGGGGATCAAGG
CGCAGCTGGTGATCGAAGGGCGTGACGCCCTGGTGGCCTGGGGCTGA

Protein sequence :
MTEAFAHDLGTLHLYSPSGVVMAAPALRRAAKRLQAYGFEVSIDADALARHQRFAGDDDLRLAALHRVAEAAPTVALATR
GGYGLTRLLDRIDWPLLARAVARGTHWVGYSDQTALHLGLLAHTKAPSWHGPLAVDDFGRSVAEGGLDEVTPDCFIEAVS
GELEAVGFRTEEGHDGLDVKGLLWGGNLTVLCSLLGTPHWPKVKGGILFLEDINEHPYRVERMLMQLQQAGVLAAQKAVL
LGDFGGWRKSPLDRGYNVKSMVAQVRAMTSTPVLTGLPIGHVPTKVTLPVGIKAQLVIEGRDALVAWG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
f304 AAC61707.1 F304 Not tested PAI I CFT073 Protein 5e-36 44