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Name : Lcho_2019 (Lcho_2019) Accession : YP_001791051.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2190970 - 2193567 bp Length : 2598 bp Strand : - Note : KEGG: mpt:Mpe_A1549 putative ATP-dependent protease (heat shock protein); TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain pro DNA sequence : ATGCGACTCGACAAGCTCACGACTGCTTTCCAACAAGCCCTGGCCGACGCGCAGAGCTTGGCCATCAACCGCGACAACCC CTACATCGAACCGGCCCACCTGTTGGCGGCGATGCTGGCGATGCAGGACGGCCCGAAGGCCTTGCTCGACCGCGCCGGCG CCAACACCGCGGCGCTGAAAACCGCGATGGACACGCTGATCAGGGGCCTGCCGCAGGTCGAGGGCAGCGGTCAGTCGGTG CAGCCGGGCCGTGATCTGCTCGCGCTGCTGCAGGCGGCTGAAAAGGATGCCGGCAAGCGCGGCGACCAGTTCGTCAGCAG CGAGCTGTTCCTGCTGGCGGTGGCCGACAGCAAGAGCGACATCGGCGGCGTGGTGCGTGGTCACGGCCTGACGCGCAAGG CGCTCGAGGCCGCGATCGACGCGGTGCGCGGTGGCGCCACGGTCGACAACGCCGAGGCCGAAGGCCAGCGCGAGGCGCTC AAGAAATACACGCTCGACCTGACCGAGCGCGCCCGCATGGGCAAGCTCGACCCGGTGATCGGCCGCGACGACGAGATCCG CCGCGCCATCCAGGTGCTGCAGCGCCGCAGCAAGAACAACCCGGTGCTGATCGGCGAGCCGGGTGTCGGCAAGACCGCGA TCGTCGAGGGCCTGGCGCAGCGCATCGTCAACGGCGAGGTGCCCGAGAGCCTGAAGAACAAGCGCGTGCTGGTGCTCGAC ATGGCCGGGCTGCTGGCCGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGCCTGAAGGCGGTGCTCAAGGAAGTGGCCGC CGACGAGGGCCGCATCATCCTGTTCATCGACGAGCTGCACACGATGGTCGGCGCCGGCAAGGCCGAGGGCGCGATCGACG CCGGCAACATGCTCAAGCCCGCGCTGGCGCGTGGCGAGCTGCACTGCATCGGCGCGACCACGCTCAACGAATACCGCAAG TACGTCGAGAAGGACGCCGCGCTGGAGCGGCGTTTCCAGAAGGTGCTGGTCGACGAACCGAGCGTGGAGGCCACGGTCGC CATCCTGCGCGGCCTGCAGGAAAAGTACGAGGTGCACCACGGCGTGCAGATCACCGACCCGGCCATCATCGCCGCGGCCG AGCTGAGCCACCGCTACGTCACCGACCGCTTCCTGCCCGACAAGGCGATCGACCTGATCGACGAGGCGGCGGCCAAGATC AAGATCGAGATGGACTCCAAGCCGGAGTCGATGGACAAGCTCGATCGCCGGCTGATCCAGCTCAAGATCGAGCGCGAGGC GGTGCGCAAGGAGAAGGACGAAGGTTCGGTGCGCCGCTTCGGCCTGATCGAGGAAGAGATCGCCAAGCTCGAACGCGAAG CGGCCGATCTGGAGGAGATCTGGAAGGCTGAAAAGGCCGCCGCGCAGGGTTCCAAGCAGTTCATGGAAGAGATCGAGAGC GCGCGCCTGCAGATCGAGGAGTTCAAGCGCAAGGGCGATTTCAACCGCGTGGCCGAGTTGCAGTACGGCAAGCTGCCCGA GCTGGAAAAGAAGCTGCACGACGCCCAGGCCAAGGAGGCCGGCAAGGCCAAGGGCGGTCAGGGCCCGCAACTGCTGCGCA CGGTGGTGGGCGCCGAGGAGATCGCCGAGGTGGTGTCGCGTGCCACCGGCATCCCGGTGGCCAAGCTGATGCAGGGCGAG CGCGACAAGCTGCTGCAGATGGAAGGCAAGCTGCACGACCGCGTGGTCGGCCAGAGCGAGGCGATCATCGCGGTGAGCAA CGCGATCCGGCGTTCACGCGCCGGCTTGAGCGACCCGAACCGGCCGCTCGGCAGCTTCCTGTTCCTGGGGCCCACCGGCG TCGGCAAGACCGAGCTGTGCAAGGCGCTGGCGGGTTTCCTGTTCGACAGCGACGACCACATGATCCGCATCGACATGAGC GAGTTCATGGAGAAGCACTCGGTGAGCCGGCTGATCGGCGCGCCCCCGGGTTACGTCGGTTATGACGAAGGCGGCTACCT GACCGAGGCGGTGCGCCGCAAGCCTTACAGCGTGCTGCTGCTCGACGAGGTCGAGAAGGCGCATCCGGACGTCTTCAACG TGCTGCTGCAGGTGCTCGACGACGGCCGCCTGACCGACGGGCAGGGCCGCACGGTCGACTTCAAGAACACCGTGATCGTG ATGACCAGCAACCTGGGCTCGCACCAGATCATGCAGATGGCCGGGCAGGACACCGAGCTGATCCGCGAGGCGGTGTGGGC CGAGGTCAAGCAGCATTTCCGCCCGGAGTTCCTGAACCGCATCGACGAGGCGGTGGTGTTCCATGCGCTCGACCAGAAGC ACATCGAGGCGATCGCGCAGATCCAGCTGAAGGCGCTGGCGGCGCGGCTGGGCAAGATGGAGATGACGCTGGAGGTCTCG CCCGAGGCGCTGGCCGAGCTGGCGAAGGTCGGCTTCGATCCGGTGTTCGGCGCGCGGCCGCTCAAGCGGGCGATCCAGCA GCGCATCGAGAACCCGGTCGCCAAGCTGATCCTGGAGGGCCGCTTCGGCCCGAAGGACGTGGTGCCGGTCAACGTCGGCG CCACCGGCGACTTCGAGTTCGGCCGCACGGTGCACTGA Protein sequence : MRLDKLTTAFQQALADAQSLAINRDNPYIEPAHLLAAMLAMQDGPKALLDRAGANTAALKTAMDTLIRGLPQVEGSGQSV QPGRDLLALLQAAEKDAGKRGDQFVSSELFLLAVADSKSDIGGVVRGHGLTRKALEAAIDAVRGGATVDNAEAEGQREAL KKYTLDLTERARMGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLD MAGLLAGAKYRGEFEERLKAVLKEVAADEGRIILFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEYRK YVEKDAALERRFQKVLVDEPSVEATVAILRGLQEKYEVHHGVQITDPAIIAAAELSHRYVTDRFLPDKAIDLIDEAAAKI KIEMDSKPESMDKLDRRLIQLKIEREAVRKEKDEGSVRRFGLIEEEIAKLEREAADLEEIWKAEKAAAQGSKQFMEEIES ARLQIEEFKRKGDFNRVAELQYGKLPELEKKLHDAQAKEAGKAKGGQGPQLLRTVVGAEEIAEVVSRATGIPVAKLMQGE RDKLLQMEGKLHDRVVGQSEAIIAVSNAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTELCKALAGFLFDSDDHMIRIDMS EFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIV MTSNLGSHQIMQMAGQDTELIREAVWAEVKQHFRPEFLNRIDEAVVFHALDQKHIEAIAQIQLKALAARLGKMEMTLEVS PEALAELAKVGFDPVFGARPLKRAIQQRIENPVAKLILEGRFGPKDVVPVNVGATGDFEFGRTVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-135 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lcho_2019 | YP_001791051.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 7e-113 | 44 |
| Lcho_2019 | YP_001791051.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 3e-101 | 41 |
