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Name : Lcho_2003 (Lcho_2003) Accession : YP_001791035.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2170440 - 2171930 bp Length : 1491 bp Strand : + Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: mpt:Mpe_A2324 succinate-semialdehyde dehydrogenase (NAD(P)+) DNA sequence : ATGGACATGACCACCAACCCGCTGGCACTGCTGAACGACCCCGGCCTGCTCAAGACCGACGCGCTGATCGACGGCGAGTG GATCGCCGGCACCAGCCGCTTCGACGTCGCCGACCCCGCCACCGGCGCCAGGCTGGCGGACGTGGCGCTGCTGGGCGCGA GCGAAACCGCAGCCGCGATCGCCGCCGCCAACGCCGCCTGGCCGGCCTGGCGCGCCAAGACCGCCAAGGAGCGCGCCGGC ATCCTGATGAAGTGGTACCAGCTGCTGATCCAGCACGCCGACGACCTGGCCCGCATCATGACCGCCGAGCAGGGCAAGCC GCTGGCCGAGGCGCGCGGCGAGGTGGTCTACGGCGCCAGCTTCATCGAGTGGTTTGCCGAAGAAGCCAAGCGCGTTTACG GCGAGACGATTCCGAGCACCGACGCCAACAAGCGCTTCATCGTGCTCAAGCAGCCGATCGGCGTCTGCGCGGCGATCACG CCGTGGAATTTCCCGATCGCGATGATCACGCGCAAGGTCGCGCCGGCGCTGGCCGCGGGCTGCCCGGTGATCATCAAGCC GGCCGAGCAGACGCCGCTGTCGGCGCTGGCCTGCGCCGAGCTGGCCCAGCGCGCCGGCATGCCGCCGGGCGTGCTCAACA TCCTGACCGGTGATGCCGAGAGCTCGATCGAGATTGGCGGCGTGCTGTGTGCCTCCGACGTGGTGCGCCACCTGAGCTTC ACCGGCTCGACCGAAGTGGGCCGCATCCTGATGCGCCAGTGCGCGCCGACGATCAAGAAGCTTAGCCTCGAACTCGGCGG CAACGCACCCTTCATCGTCTTCGACGACGCCGACATCGACAGCGCGGTCGAGGGCGCGATGGTCAGCAAGTACCGCAACG CCGGCCAGACCTGCGTCTGCGCCAACCGGCTGTACGTGCAGGACAGCGTCTACGACGCGTTCGTCGAGAAGCTCGCCGCC AAGGCCGCGGCGATCAAGGTCGGCAACGGTTTCGAGGCCGGTGTCAACCAGGGGCCGATGATCGACGCCCAGGCGCTGGC CAAGGTCGAATCCCACGTGGCCGATGCCGTCGCCAAGGGTGCCCGGGTGGTGGTGGGTGGCAGCCGAGGTGCTGGCGCGC TGGGCCAGCGTTTCTACACGCCGACGGTGCTGTCGGACGTGACCGCCGAGATGCTCTGCGCGCGCGAGGAAACCTTCGGC CCGGTGGCGCCGGTGATGCGTTTCAAGACCGAGGCCGAGGCGATCGCGCTGGCCAATGCCACCGAGTTCGGTCTGGCGGC TTATTTCTACAGCCGCGACATCGGCCGCATCTTCCGCGTCGGCGAGGCGATCGAGGCCGGCATGGTGGGCGTCAACACCG GGCTGATCTCGGTGGCCGAAGTGCCGTTCGGCGGCGTCAAGCAGTCGGGGCTCGGCCGCGAGGGCTCGCGGCACGGCATC GAGGATTACGTCGAGATGAAGTACCTGTGCCTGGGCGACATCCTGCGCTGA Protein sequence : MDMTTNPLALLNDPGLLKTDALIDGEWIAGTSRFDVADPATGARLADVALLGASETAAAIAAANAAWPAWRAKTAKERAG ILMKWYQLLIQHADDLARIMTAEQGKPLAEARGEVVYGASFIEWFAEEAKRVYGETIPSTDANKRFIVLKQPIGVCAAIT PWNFPIAMITRKVAPALAAGCPVIIKPAEQTPLSALACAELAQRAGMPPGVLNILTGDAESSIEIGGVLCASDVVRHLSF TGSTEVGRILMRQCAPTIKKLSLELGGNAPFIVFDDADIDSAVEGAMVSKYRNAGQTCVCANRLYVQDSVYDAFVEKLAA KAAAIKVGNGFEAGVNQGPMIDAQALAKVESHVADAVAKGARVVVGGSRGAGALGQRFYTPTVLSDVTAEMLCAREETFG PVAPVMRFKTEAEAIALANATEFGLAAYFYSRDIGRIFRVGEAIEAGMVGVNTGLISVAEVPFGGVKQSGLGREGSRHGI EDYVEMKYLCLGDILR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-127 | 61 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 4e-72 | 42 |
