Name : Lcho_1866 (Lcho_1866) Accession : YP_001790898.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Virulence Product : two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2019392 - 2020051 bp Length : 660 bp Strand : + Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_3399 two component transcriptional regulator, winged helix family DNA sequence : ATGCGTTTGCTGCTGCTCGAAGACGATCTGATCCTGGGCGAGGGCCTGCGCGACTACCTGCGCACCGAGGGCCATGTGGT CGACTGGTGCAGCCGCCTGGCCCATGCCGAGGCGCTGCGCGGCGAGCCCTACGACGCCCTGCTGGTCGACTGGCAGCTGC CCGACGGCTCGGGCCTGGCCTGGCTGCGCGGTCGCCGCGCCCACGGCGACACCACGCCGGCGCTGATGCTGACCGCGCGC GACCGGCTCGAAGACCGCGTGATGGGGCTCGACCAGGGCGCCGACGACTACCTCGTCAAGCCCTTCGCCCCGGAGGAACT GGCCGCCCGCCTGCGGGCGCTGGCGCGGCGCCTGGCCAGTGCGGCGGTGCCGCGGCTGAGCTTCGGCGGCGTCGAGATCG ACCTGCAGGCGCGCACCGCCTGGCGCGACGGCCCGCGCATCGAGCTGACCGCGCGCGAGTGGATGGTGCTCGAGGCCCTG GCGCTGCGGGCCGGGCGCATCGTGCCCAAGCCCGACCTCGAGCGGCTGGTGCTCGGCCAGGACTCCGAGGTGGTCAGCAA CGTGCTCGAGGTGCACATCTCCAGCCTGCGCCGCAAGCTCGGCGCGACGCTGATCGAGACCGTGCGCGGCCTCGGCTACC GCATGGGCCAGCAGGCGTGA Protein sequence : MRLLLLEDDLILGEGLRDYLRTEGHVVDWCSRLAHAEALRGEPYDALLVDWQLPDGSGLAWLRGRRAHGDTTPALMLTAR DRLEDRVMGLDQGADDYLVKPFAPEELAARLRALARRLASAAVPRLSFGGVEIDLQARTAWRDGPRIELTAREWMVLEAL ALRAGRIVPKPDLERLVLGQDSEVVSNVLEVHISSLRRKLGATLIETVRGLGYRMGQQA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
armR | AAN62112.1 | putative response-regulator ArmR | Not tested | PAGI-2(C) | Protein | 6e-21 | 47 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | BAC0487 | Protein | 3e-19 | 43 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | BAC0083 | Protein | 4e-17 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | NC_002516.2.879194.p | Protein | 4e-15 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | BAC0638 | Protein | 7e-15 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | NC_002758.1121390.p0 | Protein | 1e-11 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | NC_010079.5776364.p0 | Protein | 1e-11 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | NC_002952.2859858.p0 | Protein | 1e-11 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | NC_007622.3794948.p0 | Protein | 1e-11 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | NC_003923.1003417.p0 | Protein | 1e-11 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | NC_013450.8614146.p0 | Protein | 1e-11 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | NC_002951.3238224.p0 | Protein | 1e-11 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | NC_007793.3914065.p0 | Protein | 1e-11 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | CP000647.1.gene1136. | Protein | 6e-13 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | CP001918.1.gene2526. | Protein | 6e-13 | 41 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | BAC0530 | Protein | 7e-13 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | VFG0473 | Protein | 5e-22 | 46 |
Lcho_1866 | YP_001790898.1 | two component transcriptional regulator | VFG1390 | Protein | 8e-13 | 43 |