|
Name : Lcho_0182 (Lcho_0182) Accession : YP_001789222.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 191995 - 192987 bp Length : 993 bp Strand : + Note : KEGG: mpt:Mpe_A3809 arabinose-5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS) DNA sequence : ATGTCTGCCAGCAGCTCCCCCTTCGACGCCGAACGTGCCATCCGGATGGCACGCCAGACCCTGCAGATCGAGGCCGATGC CCTGCGCGATCTGCAGCCGCAGCAAGGCGCGTCCTTCGCCGAGACGGTGCAGGCGATGCTCGCCTGCCAGGGCCGCGTGG TCGTGATGGGCATGGGCAAGAGCGGCCATGTGGGCCGCAAGATCGCCGCCACGCTGGCGTCGACCGGCACGCCGGCGATG TTCGTGCACCCGGGCGAGGCCAGCCACGGCGACCTCGGCATGGTCACGCGCGGCGATGTCGTGCTGGCGATCTCCAACTC GGGCGAGAGCGACGAACTGGCGGCGATCCTGCCCGCGCTCAAGCGCTTGGGCGTCACGCTGGTGGCGATGACCGGCCGGG CCGAGTCGACGCTGGCCTCGCATGCCGACCTGGTGCTGTCCAACCGCGTCACCCAGGAGGCCTGTCCGCTCAACCTCGCG CCCACCGCCAGCACCACGGCGCAGCTGGCGCTCGGTGACGCGCTGGCGGTGGCGCTGCTCGATGCGCGCGGCTTCCGGGC CGAGGACTTCGCCCGCTCGCACCCGGGCGGCTCGCTGGGCCGCAAGCTGCTGACCCATGTGCGCGACATCATGCGCAGCG GCGACGCGGTGCCGCGTGTGCGCCCCGACACCGGCTTCCTCGACGTCATGCGCGAGATGAGCGCCAAGGGCCTGGGCACG ACGGCCGTGGTCGACGAAGACGGCCGCGCGATCGGCATCTTCACCGACGGCGATCTGCGCCGCGCCATCGAGGCTGGCAT CGACCTGCGCGAGCGCGATGCCCGCGGCGTGATGCATGCCGGCGCGCGCACCGTGCGCGAGGACGCCCTGGCGGTCGAGG CGGCCGGCCTGATGGAAGAGGCCCGTGTCACGACCTTGCTGGTGAGCGACGCGCAGGGCCTGCTGGTGGGCGCGATCAAC ACCAACGACCTGATGCGCGCCAAGGTGATCTGA Protein sequence : MSASSSPFDAERAIRMARQTLQIEADALRDLQPQQGASFAETVQAMLACQGRVVVMGMGKSGHVGRKIAATLASTGTPAM FVHPGEASHGDLGMVTRGDVVLAISNSGESDELAAILPALKRLGVTLVAMTGRAESTLASHADLVLSNRVTQEACPLNLA PTASTTAQLALGDALAVALLDARGFRAEDFARSHPGGSLGRKLLTHVRDIMRSGDAVPRVRPDTGFLDVMREMSAKGLGT TAVVDEDGRAIGIFTDGDLRRAIEAGIDLRERDARGVMHAGARTVREDALAVEAAGLMEEARVTTLLVSDAQGLLVGAIN TNDLMRAKVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 4e-54 | 47 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-54 | 47 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 5e-54 | 47 |
