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Name : Lcho_1580 (Lcho_1580) Accession : YP_001790612.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1678184 - 1680199 bp Length : 2016 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGGACAAGCTCGGCCTCGAGCGCGACATCGATCTGGCACTGCACCTGCCGCTGCGCTACGAGGACGAAACCCGCCTGAC GCCGCTGGCCGCCGCGCGCGAGGGCGACCTGCTGCACGTCGAGGGCGTGGTGCGCGAGGCCCGCATCGAGCTGCGCCCGC GCCGCCAGTTCATCGTCAAGCTGGTCGAGGCCCTGGGCGACGCACCCGGCCGCATCGAGCTGATCCTGCGCTTCGTCAAC TTCTACCCCTCGCACCAGAAGACCTTTGCGCCCGGCACGCGGCTGCGGGTGCGCGGCGAGTTGCGCGGCGGCTTTTTCGG CCGCGAGATCGTGCACCCGGTGTTCAAGACCGTCGAGCCCGGCGCGCCGCTGGCGCGCGAGCTGACCCCCGTCTACCCGA CCAGCGCGCAGCTGCCGCAGGCCTATCTGCGCAAGGCGGTGGCGGCGGGGCTGTCGCGGGCGCGGCTCGACGAGATCCTG CCGCCGGACCTGCTGCCGGCCGGCCTGCCGCCGCTGCGCGAGTCGCTCTACCTGCTGCACCACCCGCCGGCCGACATCAG CCTGCATGCGATCCAGGAGCGCGAGCACCCGGCCTGGCAGCGCATCAAGTTCGAGGAGCTGCTCGCCCAGCAGCTCTCGC AGCTGCAGGCCCAGCGCGAGCGCGCCAAGCTGCGTGCGCCGATGCTGCGCGGCTCGGCCGGTGGCCTGCACGAAAAGCTG CTGGCGGCGCTGCCGTTCCAGCTGACCGGGGCGCAGCGGCGTGTCGCCGAGGAGATCGCCACCGACCTCGGCCGGCCGCA GCCGATGAACCGCCTGCTGCAAGGCGACGTCGGCTCGGGCAAGACGGTGGTGGCCGCGCTCGCCGCCGCGGTGGCGATGG ACGCGGGCTGGCAGTGCGCGCTGATGGCGCCCACCGAGATCCTGGCCGAACAGCATTTCCGCAAGCTGATCCACTGGCTG GCGCCGCTGGGCATCGAGGTGGCGTGGCTGACCGGCAGCCGCAAGGGCAAGGGCCGCGCCGCGATGCTGGAGAAGGTGGC CAGCGGCGCCGCGCAGCTGGTGGTCGGCACGCACGCGGTGATCCAGGACGACGTGCATTTCGCCCGCCTCGGCCTGGCGG TGATCGACGAGCAGCACCGCTTCGGCGTGGCGCAGCGGCTCGACCTGCGCCGCAAGCTGGCGCTGCAGTCGCTCGAACCC CACCTCCTCATGATGAGCGCCACGCCGATCCCGCGCACGCTGGCGATGACCTACTTCGCCGACCTCGACGTGTCCACCAT CGACGAGCTGCCGCCCGGGCGCACGCCGATCGTCACCCGGGTGTTTGCGGCCGACCGGCGCGAGCAGGTGATCGCGCGGG TGCGCGACGAGGTCGCCAAGGGCAGCCAGGTCTATTGGGTGGTGCCGTTGATCGAGGAGAGCGAGGCGCTCGACCTGCAG AACGCCACCGAGACCCACCAGCAGCTCGGCGCCGTGCTGCCCGGCACGCAGGTCGGCCTGCTGCACGGGCGTATGCCGCC GGCCGAGAAGGCCTCGGTGATGGCGCTGTTCTCGGGCGGCCAGATGAGCGTGCTGGTCGCCACCACCGTGATCGAGGTCG GTGTCGATGTGCCCAACGCCAGCGTGATGGTGATCGAGCACGCCGAGCGTTTCGGCCTGGCGCAGCTGCACCAGCTGCGC GGGCGGGTCGGGCGCGGTTCGGTGGCCAGCGTGTGCGTGCTGCTCTACACCGGGCCGCTGTCGCAGACCGGCCGCGATCG CCTGAAGGCGATGGCCGAGACCACCGACGGCTTCGAGATCGCCCGCCGCGACCTCGAGATCCGCGGCCCCGGCGAGTTCA TGGGCGCGCGCCAGAGCGGCGACGCGCTGCTGCGGTTTGCCGATCTGGCGCAGGACGGCGAACTGCTGCAGTGCGCCCGC GAGATCGCGCCACGCCTGCTCGATCGGCACCCGGCTGCGGCGCAGGCGCAGATCCGGCGCTGGCTGGGCGGCAAGCTCGA ATACCTGAAGGCCTGA Protein sequence : MDKLGLERDIDLALHLPLRYEDETRLTPLAAAREGDLLHVEGVVREARIELRPRRQFIVKLVEALGDAPGRIELILRFVN FYPSHQKTFAPGTRLRVRGELRGGFFGREIVHPVFKTVEPGAPLARELTPVYPTSAQLPQAYLRKAVAAGLSRARLDEIL PPDLLPAGLPPLRESLYLLHHPPADISLHAIQEREHPAWQRIKFEELLAQQLSQLQAQRERAKLRAPMLRGSAGGLHEKL LAALPFQLTGAQRRVAEEIATDLGRPQPMNRLLQGDVGSGKTVVAALAAAVAMDAGWQCALMAPTEILAEQHFRKLIHWL APLGIEVAWLTGSRKGKGRAAMLEKVASGAAQLVVGTHAVIQDDVHFARLGLAVIDEQHRFGVAQRLDLRRKLALQSLEP HLLMMSATPIPRTLAMTYFADLDVSTIDELPPGRTPIVTRVFAADRREQVIARVRDEVAKGSQVYWVVPLIEESEALDLQ NATETHQQLGAVLPGTQVGLLHGRMPPAEKASVMALFSGGQMSVLVATTVIEVGVDVPNASVMVIEHAERFGLAQLHQLR GRVGRGSVASVCVLLYTGPLSQTGRDRLKAMAETTDGFEIARRDLEIRGPGEFMGARQSGDALLRFADLAQDGELLQCAR EIAPRLLDRHPAAAQAQIRRWLGGKLEYLKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 5e-96 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lcho_1580 | YP_001790612.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 4e-127 | 52 |
