Gene Information

Name : Lcho_0157 (Lcho_0157)
Accession : YP_001789197.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : ammonium transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0004
EC number : -
Position : 163308 - 164651 bp
Length : 1344 bp
Strand : -
Note : TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mfa:Mfla_0434 ammonium transporter

DNA sequence :
TTGAAACTGTTCCAAGCCCTGCGCTGGCTCGCCCCAGCCGCCCTGTCCGTCAGCCCCACCGCCCTCTGGGCCGAAGAAGC
GACGGCAGCCGCAACCGCAGTCGCAGCGGTGGCTGCACCCGTGCTCAGCGCCGGTGACACCGCCTTCATCTTCGCCTGCT
GCATCGCCGTCTGGCTGATGACCATCCCCGGCCTGGCGCTGTTCTACGGCGGCCTGGCGCGCACCAAGAACGTGTTGTCG
ATCCTGATGCAGGTCTTCACCGTGTCCTCGCTGATCACGGTGCTGTGGGCGCTCTACGGCTACACGCTGACCTTCACCGA
CGGCGGCTCGGCGCAGTCGTTCATCGGCGGGCTCGACAAGCTGTTCATGAAGGGCGTGGGGGCGGATGCGCTGCAGGGCA
CGATCCCCGAGCTGCTCTACTTCTTCTTCATGCTGCTGTTCGCGGCCATCACGCCCACCATCATCGTGGGCGCGTTTGCC
GAGCGCATCAAGTTCTCGGCCGTGCTGGTCTTCATGGCGATCTGGTTCACCATCAACTACGTGCCGATGGCGCACATGGG
CTGGGGTGGCGGCTGGGTCTTCAAGCTCGGGGCGCAGGACTTTGCCGGCGGCAACGTGGTGCACGTCAACGTCGGCATCG
CCGCGCTGGTGGGCGCCTGGATGGTGGGCGCGCGCAAGGGTGCGGGCACGGGCGCCATGTCGCCGCACAACATGACCATG
ACCATGACCGGCGGCTCGATGCTGTGGGTCGGCTGGCTGGCCTTCTGCGGCGGTTGCGCGCTGGCGGCCAACGGCTTCGC
GATGCTGGTGGTGGTCAACACGATGCTCGCCGCCGCTGCGGGCGCGATGTCGTGGGTGCTGGTGGAGTGGCTGCACCGCG
GCCGCCCGAGCATGCTCGGTGCCGTCTCGGGTGCGATCGCCGGCCTGGTGGCGATCACGCCGGCCTGCGGTTTTGTCGGC
CCGATGGGCGCGCTGGCGATCGGCGTGATCGTCTCGCCGATCTGCATCTGGGCAGTCGAGAAGCTCAAGCCGATGATCGG
CCTCGATGACTCGTTCGACGTCTTCGGCGTGCATGGCGTGGGCGGCATCGTCGGCGGCATCCTGACCACGATCTTCGCGA
TGCCGAGCCTGGGTGGCCTGGGCTTTGCCGAAGGCCGCGACTTCGGCTCGCAGATGCAGGTGCAGCTGATGGTGATCGGC
TTCAGCGTCGTCTATTCGGCCATCAGCAGCTGGATCGCCTTCAAGCTGACGTCCATCGTCTGCCGCGGCCTGCGCGTCGA
TGAAGACGAAGAAGACGAAGGTCTGGACCTGATCTCGCACGGCGAGCCGGGCTACAAGTACTGA

Protein sequence :
MKLFQALRWLAPAALSVSPTALWAEEATAAATAVAAVAAPVLSAGDTAFIFACCIAVWLMTIPGLALFYGGLARTKNVLS
ILMQVFTVSSLITVLWALYGYTLTFTDGGSAQSFIGGLDKLFMKGVGADALQGTIPELLYFFFMLLFAAITPTIIVGAFA
ERIKFSAVLVFMAIWFTINYVPMAHMGWGGGWVFKLGAQDFAGGNVVHVNVGIAALVGAWMVGARKGAGTGAMSPHNMTM
TMTGGSMLWVGWLAFCGGCALAANGFAMLVVVNTMLAAAAGAMSWVLVEWLHRGRPSMLGAVSGAIAGLVAITPACGFVG
PMGALAIGVIVSPICIWAVEKLKPMIGLDDSFDVFGVHGVGGIVGGILTTIFAMPSLGGLGFAEGRDFGSQMQVQLMVIG
FSVVYSAISSWIAFKLTSIVCRGLRVDEDEEDEGLDLISHGEPGYKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00287 YP_008207752.1 Ammonia permease Not tested AbaR25 Protein 5e-66 48
BJAB0868_00291 YP_008211617.1 Ammonia permease Not tested AbaR26 Protein 5e-66 48