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Name : Lcho_1272 (Lcho_1272) Accession : YP_001790306.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1356601 - 1358247 bp Length : 1647 bp Strand : - Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A1639 ABC peptide transporter, ATPase subunit DNA sequence : ATGACGCCCGTCATCGGAATGCCGCTGCTGCAGGTCGAGCACCTCCACGTCGCGTTCGGCGACAGCCGGGTGGTCGACGA CGTCTCGTTCGAGATCGGCGTGGGTGAGAAGTTCGCGCTGGTCGGCGAGTCGGGTTCGGGCAAGTCGATCAGCGCGATGT CGATCCTGCGGCTGGTCGAAGGTGCGGCCAGCAGCGGCGCGATCCGCTTCGACGGCGCCGACCTGATGGCGCACAGCGAG CGCCAGATGCGCGGCATCCGCGGCAAGGACATCGCGATGATCTTCCAGGAGCCGATGACGGCCCTGAACCCGCTCTACAC GGTGGGCAACCAGATCGGCGAGGTGCTCGAACTGCACGAGGGCCTGAGCGCACGCGAGGCCCGCGCGCGCGCCATCGAGC TGCTGGCGCGCACCGGCATCCCCGAGCCCGAACGCCGCATCGACAGCTACCCGCACCAGCTCTCGGGCGGCCAACGCCAG CGCGTGATGATCGCGATGGCGCTGGCCTGCAAGCCGCGCCTGCTGATCGCCGACGAGCCGACCACCGCGCTCGACGTCAC CATCCAGGCGCAGATCCTGGCCCTGCTCGACGAGCTGCAGCGCGAGATGGGCATGGCGCTGCTGTTCATCACGCACGACC TCAATCTGGTCGGCCGCTACAGCGACCGGGTGGCGGTGATGGAGCGCGGGCGCATCGTCGAGGCCGGCGCCACCGCGCGG GTGTTCGCGCGGCCACGCCACCCGTACACGCAGAAGCTGCTGGCGAGCCGGCCGGTGCCGCTGCCGCCGGACCGCGAGCT GCGCAGCACGCCGCTGCTGCAGGCGCAGTCGCTCAAGGTCGAGTTCGTGCAGAACGAGGGCTGGTTCAGGAAGCGCCATT TCGTCGCGGTGAAGGACGCCTCGCTGCTGCTGCCACGCGGCCAGACGCTCGGCGTGGTCGGCGAATCGGGCTCGGGCAAG ACCACGCTCGGCATGGCGCTGCTGTCGCTGCAGGCGCTCGCCGGGGGCGAGGTGACGCTGCACAACCTGGTGGGCAGCAA CACCAATCAGCGTGCCAACCAGCGTGTCGACCTGGCCGAAGGTGCCGACCTGCGCGCGCTGCGGCGGCGCATGCAGGTGG TGTTCCAGGATCCGTTCGCGGCGCTGTCGCCGCGTCTGACGATCGGCCAGATCGTCGGCGAGGGCCTGGCGCTGCACATG CCCGAACTGAGCGCCGTGCAGCGCGAGGCGCGCATCCGCGCCATGCTGGGCGAGGTCGGACTGGAGTCGGCCGATGCCCA CAACCGCGGTGCCGGCGACATGCTGCAGCGCTACCCGCACGAGTTCTCGGGTGGCCAGCGCCAGCGCATCGCGATCGCGC GGGCGGTGATCCTGCGCCCCGAACTGCTGGTGCTCGACGAGCCGACCTCGGCGCTCGACGCCTCGGTGCAGCAGCAGGTG CTGGCGCTGCTGCTGCGGCTGCAGCGCGAGCTCGGCATGAGCTACCTGTTCATCAGCCACGACCTGGCGGTGATCCGCGC GATGGCGCATCAGGTGCTGGTGATGAAGGACGGCGAGATCGTCGAGCGCGGCGCCACCGCGCAGGTGTTCGCAGCGCCCA GGCATCCGTACACGCGCAGCCTGCTCGAAGCGGCGCTGATGCACTGA Protein sequence : MTPVIGMPLLQVEHLHVAFGDSRVVDDVSFEIGVGEKFALVGESGSGKSISAMSILRLVEGAASSGAIRFDGADLMAHSE RQMRGIRGKDIAMIFQEPMTALNPLYTVGNQIGEVLELHEGLSAREARARAIELLARTGIPEPERRIDSYPHQLSGGQRQ RVMIAMALACKPRLLIADEPTTALDVTIQAQILALLDELQREMGMALLFITHDLNLVGRYSDRVAVMERGRIVEAGATAR VFARPRHPYTQKLLASRPVPLPPDRELRSTPLLQAQSLKVEFVQNEGWFRKRHFVAVKDASLLLPRGQTLGVVGESGSGK TTLGMALLSLQALAGGEVTLHNLVGSNTNQRANQRVDLAEGADLRALRRRMQVVFQDPFAALSPRLTIGQIVGEGLALHM PELSAVQREARIRAMLGEVGLESADAHNRGAGDMLQRYPHEFSGGQRQRIAIARAVILRPELLVLDEPTSALDASVQQQV LALLLRLQRELGMSYLFISHDLAVIRAMAHQVLVMKDGEIVERGATAQVFAAPRHPYTRSLLEAALMH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-76 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-76 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-76 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-76 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-85 | 41 |
