Gene Information

Name : Lcho_1260 (Lcho_1260)
Accession : YP_001790294.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : thymidylate synthase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0207
EC number : 2.1.1.45
Position : 1346403 - 1347251 bp
Length : 849 bp
Strand : -
Note : PFAM: thymidylate synthase; KEGG: ajs:Ajs_1197 thymidylate synthase

DNA sequence :
ATGTCCACCGAAGCGAGTTTCCAGCGCCCCGTGCGCTCCCAGTTCGAAGACCTGATGCGCCTGGTGCACACCACCGGCGT
GGCCAAGGGCGACCGCACCGGCACCGGCACGCGCAGCCTGTTCGGCCACCAGATGCGCTTCGATCTCAGCGAAGGTTTCC
CGCTGGTGACGACCAAGAAGGTGCACCTGAAGTCGATCATCCTGGAGCTGCTGTGGTTTTTGCGCGGCGAGCGCAACGTG
CGCTGGCTGCAGGAGCGCGGCTGCACCATCTGGGACGAATGGGCGCGTGACGACGGTGATCTCGGGCCGGTCTACGGCGT
GCAATGGCGCAGCTGGCCGACCGCCGACGGCGGCCACATCGACCAGATCGCCGAGGTGGTGCAGCAGCTGCGCAGCAACC
CCGATTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCCGAGCTGCCGCAGATGGCGCTGATGCCCTGCCACGCGCTG
TTCCAGTTCTACGTCGCGCCGGCCACGCACGAAGGCGGCCGCGGCAAGCTCAGCTGCCAGCTCTACCAGCGCAGCGCGGA
CATCTTCCTGGGCGTGCCGTTCAACATCGCCAGCTACGCGCTGCTGACCCACATGCTGGCGCAGCAATGCGACCTCGACG
TGGGCGACTTCATCTGGACCGGCGGCGACTGCCACCTCTACGACAACCACACCACGCAGGTCGAGACCCAGCTGGCGCGC
ACGCCCTTCGCGTATCCGACGCTGCACATCAAGCGCCGGCCGGCATCGATCTTCGACTACGCCTGCGACGACTTCGAGGT
GCTCGACTACCAGCACCACCCGGCCATCAAGGCGCCGGTGGCGGTATGA

Protein sequence :
MSTEASFQRPVRSQFEDLMRLVHTTGVAKGDRTGTGTRSLFGHQMRFDLSEGFPLVTTKKVHLKSIILELLWFLRGERNV
RWLQERGCTIWDEWARDDGDLGPVYGVQWRSWPTADGGHIDQIAEVVQQLRSNPDSRRIIVSAWNVAELPQMALMPCHAL
FQFYVAPATHEGGRGKLSCQLYQRSADIFLGVPFNIASYALLTHMLAQQCDLDVGDFIWTGGDCHLYDNHTTQVETQLAR
TPFAYPTLHIKRRPASIFDYACDDFEVLDYQHHPAIKAPVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
thyA YP_001800914.1 thymidylate synthase Not tested Not named Protein 2e-86 63