Gene Information

Name : Lcho_1234 (Lcho_1234)
Accession : YP_001790268.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : -
Position : 1320882 - 1321394 bp
Length : 513 bp
Strand : -
Note : TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: mpt:Mpe_A3047 signal peptidase II

DNA sequence :
ATGCGCTCCAAGTCCCGTTCATCCATCAGCCTGACGACCTGGCTGATGCTGGCCCTGCTGGTCATCGTGGCCGACCAGCT
CACCAAGGTGCTGATCGTCGCGCGCTTCGCCTACGGCGACAGCGTCACGCTGACGGGCTACTTCAACCTGGTGCGGGTGC
ACAACACCGGCGCGGCGTTCAGCTTCCTGGCCGACGCCGCGGGCTGGCAGCGCTGGTTCTTCATCACGCTGGGCATCGCC
GCGTCGGGCATGTTCATCTGGCTGCTCCGATCGCACGCCAGCCAGAAGCTGTTCGCCTTCTCGGTGTCGATGCTGCTGGG
CGGTGCGATCGGCAACGTGATCGACCGCGCCTGGCACGGCTACGTGGTCGACTTCCTGCAGTTCCATTGGGACTTCCTCG
CGCCGATCTTTCCGGGCGGCTACTTCCCGTCCTTCAACGTGGCCGACTGCGCCATCACGGCCGGCGCGATCGGGCTGATC
CTCGACGAGATCGGGCGCGTGCGGCGCAGCTGA

Protein sequence :
MRSKSRSSISLTTWLMLALLVIVADQLTKVLIVARFAYGDSVTLTGYFNLVRVHNTGAAFSFLADAAGWQRWFFITLGIA
ASGMFIWLLRSHASQKLFAFSVSMLLGGAIGNVIDRAWHGYVVDFLQFHWDFLAPIFPGGYFPSFNVADCAITAGAIGLI
LDEIGRVRRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 2e-14 43
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 2e-14 43
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 2e-14 43
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 2e-14 43
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 2e-14 43
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 1e-19 42