Gene Information

Name : Lcho_1171 (Lcho_1171)
Accession : YP_001790205.1
Strain : Leptothrix cholodnii SP-6
Genome accession: NC_010524
Putative virulence/resistance : Unknown
Product : FAD linked oxidase domain-containing protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 1253770 - 1254897 bp
Length : 1128 bp
Strand : +
Note : PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A3639 FAD linked oxidase

DNA sequence :
ATGAACACGATCCGACAAGACGCCGCGCTGCAGTCGCTGCAAGAGACCGTGCGCGCGGCCATCGCCGACCGCGCGCCGCT
GGAGATTGCCGGCGGCGGCAGCAAGGCCTTCCTGAATCCGCCGACCGATGCGACGCTGCGCCGGCTCGACGTGCGCCCAC
TCGCCGGCATCAGTGCCTACGAGCCCAGCGAGCTGGTCGTCACGGTGCGCGCCGGCACGCCGCTGGTCGAGCTGGAAGCG
GCACTGGCCGAGTGCGGGCAGTGCCTGCCGTTCGAACCGCCGCGGTTCGCCGTGAATGGCCCGTCGGCCGGCACCGTGGG
CGGCATGGTCGCCAGCGGCCTGGCCGGCCCGGCACGCGCCAGCGTGGGCAGCGTGCGCGACTACGTGCTCGGCGCCACCC
TGCTCGACGGCCGTGCCGATCTGCTGAGCTTCGGCGGGCAGGTGATGAAGAACGTCGCCGGCTACGACGTCTCGCGGCTG
CTGGCGGGCTCTTTCGGGGCGCTGGGCGTGATCTGCGAGGTCTCGCTCAAGGTGCTGCCGCGGCCGGTGGCGAGCACCAC
GCTGCGTTTCGAGATGGACGAGGCGCAGGCGCTCGCCAGCCTCAAGGCCTGGTGTCGCAAGCCGCTGCCGATCAGCGCCA
GCGCCTGGAGCCGCGGCGTGCTGTGGCTGCGCCTGAGCGGCGCGCAGGCGGCGGTGGCGTCGGCGCAGCGCACGCTGGGT
GGCGAGCCGATCGCGGACGACCTGGCGCAGCGTGGCTGGCTCGACGTGCGCGACCAGAACCACCCGTTGCTGGTCGACGT
GCTGCCGCGCGGGCGGCGGCTGTGGCGCCTGTCGGTGCCGCCGCACACCGGCCGGCTGGCGCTGCCCGGCGCGGTCGGCG
ACAGCCTGGTCGAGTGGCACGGCGGCCAGCGCTGGGCCCTGAGCGATGCGCCGCCCGCGCTGGTGCACGCGCTGGCGGCC
GAGGTCGGCGGCCATGCGCGCATCTGGCGCGGCGCCTTGGCCGGCGACGCCGTGCAGCCGGCGCTGTCCGAGTTGTCGGC
GCCGCTGCACGCGGTGCACCAGCGCATCAAGGACGCCTTCGATCCCCTCCATCTTTTCAACCCCGGCCGGCTGGCTGCGG
GGCTCTGA

Protein sequence :
MNTIRQDAALQSLQETVRAAIADRAPLEIAGGGSKAFLNPPTDATLRRLDVRPLAGISAYEPSELVVTVRAGTPLVELEA
ALAECGQCLPFEPPRFAVNGPSAGTVGGMVASGLAGPARASVGSVRDYVLGATLLDGRADLLSFGGQVMKNVAGYDVSRL
LAGSFGALGVICEVSLKVLPRPVASTTLRFEMDEAQALASLKAWCRKPLPISASAWSRGVLWLRLSGAQAAVASAQRTLG
GEPIADDLAQRGWLDVRDQNHPLLVDVLPRGRRLWRLSVPPHTGRLALPGAVGDSLVEWHGGQRWALSDAPPALVHALAA
EVGGHARIWRGALAGDAVQPALSELSAPLHAVHQRIKDAFDPLHLFNPGRLAAGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcE CAE85244.1 GlcE protein Not tested PAI V 536 Protein 9e-63 45