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Name : fliP (Lcho_1026) Accession : YP_001790062.1 Strain : Leptothrix cholodnii SP-6 Genome accession: NC_010524 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : 3.1.1.3 Position : 1094649 - 1095437 bp Length : 789 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAAGACTCGACACGACGCCGCCCGTTTCCTGCGCCGCAACGCGCACGCCGGGCTGATGCTGGGCTTGACGGTGATATC GGCCTGGCCTGCAGTAGCTTTAGCCCAGGGCGCACCGGCGGCCCTGCCGCTGATGGTCGGCCAGGGTGGCAGCGGCACGA CGTTTTCGGTGCCGATCCAGACGCTGCTGTTCTTCACCGCGCTGTCGTTCCTGCCGGCGGTGCTGCTGATGATGACGGGC TTCACCCGCATCGTCATCGTGCTGGGCCTGCTGCGCCAGGCGCTGGGCACGCAGGCGGCGCCGCCGAACCAGGTGATCGT CGGGCTGTCGCTGTTCCTGACCTTCTTCGTGATGGCGCCGACGCTCGACCGCGTCTATGCCGATGCCTACAAGCCCTACG CGGCCAACCAGATCGGCTTCGAGGAAGCGATCGCGCGTGGCGAGGTGCCGATGCGCCAGTTCATGCTCAAGCAGACGCGG CAGTCGGACCTGGCGCTGTTCGCCCGGCTGGCCAAGCTCGATCCGGCGGTGAAGTCCGAGCAGGCGCCGCTGCGGGTGCT GGTGCCGGCGTTCGTGACCAGCGAGCTGAAGTCGGCGTTCCAGATCGGTTTCCTGATCTTCATCCCGTTCCTGGTGATCG ACATGGTGGTGGCCAGCGTGCTGATGAGCCTGGGCATGATGATGTTGTCGCCGGTGCTGGTGGCGCTGCCGTTCAAGCTG ATGCTTTTTGTGCTGGCCGACGGCTGGAACCTGTTGCTGGGTTCGCTGGCGGCGAGTTTTGCGGTCTGA Protein sequence : MKTRHDAARFLRRNAHAGLMLGLTVISAWPAVALAQGAPAALPLMVGQGGSGTTFSVPIQTLLFFTALSFLPAVLLMMTG FTRIVIVLGLLRQALGTQAAPPNQVIVGLSLFLTFFVMAPTLDRVYADAYKPYAANQIGFEEAIARGEVPMRQFMLKQTR QSDLALFARLAKLDPAVKSEQAPLRVLVPAFVTSELKSAFQIGFLIFIPFLVIDMVVASVLMSLGMMMLSPVLVALPFKL MLFVLADGWNLLLGSLAASFAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-25 | 43 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-25 | 43 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-25 | 43 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-25 | 43 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-25 | 43 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-25 | 43 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-24 | 42 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 7e-23 | 42 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 8e-25 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001790062.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 1e-62 | 67 |
| fliP | YP_001790062.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 7e-62 | 67 |
| fliP | YP_001790062.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 5e-55 | 59 |
| fliP | YP_001790062.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 2e-50 | 51 |
| fliP | YP_001790062.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 2e-21 | 41 |
