Gene Information

Name : CLK_0337 (CLK_0337)
Accession : YP_001786285.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Virulence
Product : HTH DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1053834 - 1054031 bp
Length : 198 bp
Strand : +
Note : identified by match to protein family HMM PF01381

DNA sequence :
GTGAAAAATAAGCTGGAAGAAATAAGAAAAGAACGAGGGATTAACCAGGAAGAGCTAGCAGATATTTTAGAGGTATCTCG
TCAAACTATTAGCTCCTTGGAGAACGGGAGGTATAATCCATCTATTATTTTAGCCTTCAAAATTGCACGGTATTTTAATA
AAAATATTGAAGATATATTTATTTATGAGGAGGAATAA

Protein sequence :
MKNKLEEIRKERGINQEELADILEVSRQTISSLENGRYNPSIILAFKIARYFNKNIEDIFIYEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-09 53
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 7e-10 53
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-11 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_0337 YP_001786285.1 HTH DNA-binding protein VFG2168 Protein 3e-10 53
CLK_0337 YP_001786285.1 HTH DNA-binding protein VFG2175 Protein 3e-10 53