Gene Information

Name : CLK_0187 (CLK_0187)
Accession : YP_001786136.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 916601 - 917293 bp
Length : 693 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGGAATTATTAAAAGTTAAAGATCTTTGTAAAAGTTATGGAAAAGGTGAAATAAAAGTAGATGCCTTAAAAAATATTAA
TTTAACTATAAATCAAGGAGAATTTGTGGCTATAGTTGGTCCTTCAGGTTCTGGTAAAAGTACATTACTTCATCTTTTAG
GGGGAGTGGACAAACCAACCTCTGGTAAAGTTGTTTTAGAAGGTACAGATATATATTCTTTAAAGGAAAATGAATTAGCT
ATATTAAGAAGAAGAAAAATAGGATTTATATTTCAGTTTTATAATCTAATACCAGTACTTACTGCAGAAGAAAATATGGA
AATGCCAGTGCTGTTAGATAATAAAAAAACAGATAAAAAATACATGAAGGAACTTTTAGATATATTAGGACTAAGAGAAA
GAAAAAGTCACTTACCTTCACAGTTGTCTGGTGGACAGCAGCAAAGGGTTTCTATAGGTAGAGCCCTAGCTAATAAACCA
TCTATAATATTAGCAGATGAACCTACAGGTAATCTAGATTCTAAAAATTCCAAGGAAATAATAGAACTTTTAAGATATTC
AGTTAAAAAATATAATCAAACCCTAGTGCTTATAACCCATGACTTAAATATAGCAAAAATGGCAGATAGAGTTATAACCA
TAGCAGATGGAGAAGTTAAAGGGGACGAGGTGACTAAAGTTGAAAAGCTATAG

Protein sequence : 
MELLKVKDLCKSYGKGEIKVDALKNINLTINQGEFVAIVGPSGSGKSTLLHLLGGVDKPTSGKVVLEGTDIYSLKENELA
ILRRRKIGFIFQFYNLIPVLTAEENMEMPVLLDNKKTDKKYMKELLDILGLRERKSHLPSQLSGGQQQRVSIGRALANKP
SIILADEPTGNLDSKNSKEIIELLRYSVKKYNQTLVLITHDLNIAKMADRVITIADGEVKGDEVTKVEKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-41 48
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-41 48
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-41 48
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_0187 YP_001786136.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-66 62
CLK_0187 YP_001786136.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-55 52
CLK_0187 YP_001786136.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-44 49
CLK_0187 YP_001786136.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-36 42