Gene Information

Name : CLK_0173 (CLK_0173)
Accession : YP_001786122.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 902084 - 903016 bp
Length : 933 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
GTGGAAAACGGTGGACTGGTTTTAGATGTGAAAAACATTTCAAAAAAAAGAGGAAAAACACCAATATTAAAAGATGTGAA
CTTCTCAATAGGGGAAGGTGAAATATGCGGTTTTGTAGGGAGAAACGGGGCAGGAAAAACTACTTTAATGAAAATCATAA
CAAGTATGTTATTTCCAAATGAAGGTGAAATCATAATATGTGGCAAGAATTTAAAAACTGAAAGAGAAGAAGCTTTAAAA
AATATTGGTGCAGTGATAGAAACTCCTGAGATGTACGGATATTTAACGGGAAGACAAAATTTAAATTATATAGCTAGTAT
GTTAAAAGATATAACAAAAGATGATATAGAAGAGGCTATAAGATATTCTAATTTAGGAGATAAAATTGATGAAAAAGTAA
AAAAATATTCTTTAGGTATGAAGCAAAGACTGGGTTTAGCCCAAGCACTAATAGGAGATGTATCTTTATTAATATTAGAC
GAGCCTACCAATGGATTAGATCCACTGGGAGTTGTAGAGCTTAAAAATACTATAAATACTTTAGCTAAAGAAAAAGGAGT
AAGTGTTTTTATATCTTCTCATATTTTAAGTGAGATTGAAAATATATGTACAAAGGTTGTCTTTATAGATAATGGCGAAA
TTATTAACATTCAAAAAATGGATGAAGAATCCCAAGTTAATAATATAAAAAATATGTTTATAAACACTGATTTACCTGAA
AAAGCAGCAGAAATTGTTAAAAGTATACCTGATATAGAACTATTAAAGGTTAAAAAGAATGGTGTTTCAGTTTTAGTAAA
CACTGATATATGTGATATTACCAAAATATTAATAGCCTTACATAATGAAGGAGTAAATGTAGAAGGTTTTTCTGAAGTAA
AAGAAAAATTAGAGGATAAATTTATAAAAATAGTGGGGGATAATAATGGTTAA

Protein sequence :
MENGGLVLDVKNISKKRGKTPILKDVNFSIGEGEICGFVGRNGAGKTTLMKIITSMLFPNEGEIIICGKNLKTEREEALK
NIGAVIETPEMYGYLTGRQNLNYIASMLKDITKDDIEEAIRYSNLGDKIDEKVKKYSLGMKQRLGLAQALIGDVSLLILD
EPTNGLDPLGVVELKNTINTLAKEKGVSVFISSHILSEIENICTKVVFIDNGEIINIQKMDEESQVNNIKNMFINTDLPE
KAAEIVKSIPDIELLKVKKNGVSVLVNTDICDITKILIALHNEGVNVEGFSEVKEKLEDKFIKIVGDNNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 1e-23 41
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 1e-23 41
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 1e-23 41
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 1e-23 41