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Name : CLK_0047 (CLK_0047) Accession : YP_001785998.1 Strain : Clostridium botulinum Loch Maree Genome accession: NC_010520 Putative virulence/resistance : Unknown Product : ABC transporter permease Function : - COG functional category : V : Defense mechanisms COG ID : COG0842 EC number : - Position : 778760 - 779806 bp Length : 1047 bp Strand : + Note : identified by match to protein family HMM PF01061 DNA sequence : ATGAGGATACGTGCATTAATAAAAAGGATAAGTTTACAAATGCTCAGGGATAAAAGAACTTTAGCATTACTATTTGTTGC TCCCGTTCTTATACTAACACTAATGTATTTTTTATTTAATGGTAGTACAGTTAATCCTAAATTAGGTGTAGTTGATTTGA ACAAAGATATAATAGAGGCGTTAAAAAGTGGAGATATAAATGTAATAGAATATGAAACTGCTTCTAATGAAGTTATTATC AAAGATAAGCTTGATGGTTTATTAGAAATGGATAATAAAACTTTAAAATTGACTCTTGAAAATAGTGATCCTTCTAAAGC TAAGCTTCTTAAAATGAAGATAAATCAAGCTATAGCTTCTCAATCTAGAATGGCTAATATTACTTTACCAGTTAAACTTA AGACACCGACTATTGATACAAATTATATTTATGGAAATAGTGAAACTACATTTTTTGATGTATTAAGTCCTATCTTAATT GGATTTTTTGTATTCTTTTTTGTTTTTTTAATATCTGGAATTGGTCTTTTGCGTGAGAGGACTACTGGAACCCTAGAACG TCTAATGGCCACCCCTATAAAAAGATACGAAGTAGTAATAGGATATCTAGTAGGCTATGGTATCTTTGCAGTTATTCAAA CATTAATTGTAGTTTTATTTTCAATAAATATTTTACATATTATACTTGCTGGATCTATTTTAAATGTAATATTAATTAAT TTACTTTTAGCTTTAGTAGCTTTATCTTTAGGAATTTTGTTATCAACTTTTGCTTCCTCTGAGTTTCAAATGATTCAATT TATCCCTTTAGTAATAATTCCACAAATATTTTTTGCAGGAATTTTTCCACTTGAAGGTATGGCTAATTGGTTACAAACAA TTGGGAAAATCATGCCTATTTATTATGGAGCAGATGCATTAAAAAGTGTAATGTATAAGGGATATAATTTAAATCAAATA ACTAACGATTTATTATTTTTAGTTATATTTGCAAGCATATTTATTATTTTGAATATAGTTGCTTTAAAAAAATATCGCAG ATTATAA Protein sequence : MRIRALIKRISLQMLRDKRTLALLFVAPVLILTLMYFLFNGSTVNPKLGVVDLNKDIIEALKSGDINVIEYETASNEVII KDKLDGLLEMDNKTLKLTLENSDPSKAKLLKMKINQAIASQSRMANITLPVKLKTPTIDTNYIYGNSETTFFDVLSPILI GFFVFFFVFLISGIGLLRERTTGTLERLMATPIKRYEVVIGYLVGYGIFAVIQTLIVVLFSINILHIILAGSILNVILIN LLLALVALSLGILLSTFASSEFQMIQFIPLVIIPQIFFAGIFPLEGMANWLQTIGKIMPIYYGADALKSVMYKGYNLNQI TNDLLFLVIFASIFIILNIVALKKYRRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0082 | YP_251997.1 | hypothetical protein | Not tested | SCCmec | Protein | 4e-59 | 50 |
| SE0095 | NP_763650.1 | hypothetical protein | Not tested | SCCpbp4 | Protein | 6e-60 | 50 |
| SH2614 | YP_254529.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 9e-61 | 48 |
