Gene Information

Name : CLK_3795 (CLK_3795)
Accession : YP_001785931.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 708189 - 708869 bp
Length : 681 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAGTATATTAAAAGGTATTAATATTAAAAAGAAAATTAATATAGGAGATAATTCCTATGATATATTAAATGGTATTAA
TCTAGGAATTAATGAGGGTGAATTTTTAAGTATAATGGGCCAATCTGGCGCTGGCAAAAGTACATTATTATATATTCTTA
GTGGCTTAGACAAGCCAAGTGAAGGTAGCGTATTGTTTGAAAATGATTATATTTTCAATATGAAGGATAGCAGGCTTAGT
AAGTTAAGAAGAGAAAATTTTGGGTTTATTTTTCAGTTTTATAATCTAATAGAAGGTTTAAATGTTGAGGATAATATATC
AATTATATTTGAATATGAAGGAGTTCCTAAAAAAAAGTATAAGGAAAAATTAGAATTTTTACTTAATAAAGTGGGACTAT
ATGAAAAAAGAAAATGTTATCCATATCAATTATCAGGAGGGCAACAACAAAGAGTAGCTATAGCTAGAGCATTGATTACA
GATCCTAAAATAATATTTGCAGATGAACCCACAGGAAGTTTAGACTCTAACTCTGGTAACAAGATCTTAGAAATACTAAA
ATCTTTGAATGTAAATGATAAAAAAACTATAGTGATGGTTACCCATGATAAGCATGCAGCTTCATTTAGTAACAGAATTA
TAGAAATAAAAGATGGAAAGATTGATATAAGTAATAAATAA

Protein sequence : 
MSILKGINIKKKINIGDNSYDILNGINLGINEGEFLSIMGQSGAGKSTLLYILSGLDKPSEGSVLFENDYIFNMKDSRLS
KLRRENFGFIFQFYNLIEGLNVEDNISIIFEYEGVPKKKYKEKLEFLLNKVGLYEKRKCYPYQLSGGQQQRVAIARALIT
DPKIIFADEPTGSLDSNSGNKILEILKSLNVNDKKTIVMVTHDKHAASFSNRIIEIKDGKIDISNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-36 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_3795 YP_001785931.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-36 47
CLK_3795 YP_001785931.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-34 47
CLK_3795 YP_001785931.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-37 45