Gene Information

Name : CLK_3781 (CLK_3781)
Accession : YP_001785917.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Virulence
Product : DNA binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 694876 - 695088 bp
Length : 213 bp
Strand : +
Note : identified by match to protein family HMM PF01381

DNA sequence :
GTGAAAAATAGGGTAAAAGAATTACGAACTGCATCCAATATGACACAACAGCAGCTTGCTGATTTAGTTTCAGTTTCCTC
AAGAACCATTATTTCACTTGAAAAAGGACAGTACAATCCATCAATTATGCTGGCATATAAGATAGCTATTGTTTTTAACA
CCACTATTGAAGATTTATATTGTTTAGAGGGGAATTTGGAAGATGAAGATTAA

Protein sequence :
MKNRVKELRTASNMTQQQLADLVSVSSRTIISLEKGQYNPSIMLAYKIAIVFNTTIEDLYCLEGNLEDED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-05 44
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-05 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_3781 YP_001785917.1 DNA binding protein VFG2168 Protein 7e-06 44
CLK_3781 YP_001785917.1 DNA binding protein VFG2175 Protein 7e-06 44