Gene Information

Name : CLK_3685 (CLK_3685)
Accession : YP_001785823.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Resistance
Product : cadmium resistance transcriptional regulator CadC
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 585478 - 585843 bp
Length : 366 bp
Strand : +
Note : identified by match to protein family HMM PF01022

DNA sequence :
ATGGATAAAGAAAAACAGATAGATACTTGCACATGCAATGTAATTCATCATGATGTAGTAGATAAAGTTAAAGATAATAT
GATAGAAGAAGATAAAGCACAGGATTTAGGAGATTTTTTTAAGGTTCTATCAGAACCGACTAGAATAAAAATTTTATATG
CATTATCATCATCAGAAATGTGTGTATGTGATATTTCAAATCTTCTTAATATGACACAATCAGCGGTGTCTCATCAACTT
AAAGTTTTAAGAACAGCTAGACTTATAAAATTTAGAAAAGAGGGTAAAGTTGTTTATTATTCATTAGATGACTCACATGT
AGAGAATGTATTTAAGCAAGGACTAGAACACATAATGCATAGATAA

Protein sequence :
MDKEKQIDTCTCNVIHHDVVDKVKDNMIEEDKAQDLGDFFKVLSEPTRIKILYALSSSEMCVCDISNLLNMTQSAVSHQL
KVLRTARLIKFRKEGKVVYYSLDDSHVENVFKQGLEHIMHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 7e-17 42
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 7e-17 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_3685 YP_001785823.1 cadmium resistance transcriptional regulator CadC BAC0366 Protein 1e-17 43