Gene Information

Name : CLK_2765 (CLK_2765)
Accession : YP_001788664.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3657487 - 3658179 bp
Length : 693 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence :
GTGAATTATAAAATATTAATAGTAGATGATGATAAAACTATAGTGGAATTTTTACAAATATTTTTAATTAAGGAAGGGTA
TGAGGTAAAGTTTTCTTATAATGGAGAAGAAGCTTTAAATAAAATAGAAAATGAGAAGTTTGATTTGATTTTAATGGATA
TAATGATGCCTAAAATAGATGGATTTGAAGCTATTAAAATAATAAGAAAACTTACTAATACGCTGATTATATTTTTAACA
GCAAAAGATAATCAGCAAGACAAAATTAAAGGATTCATTTCTGGATGTGATGATTACATAACAAAACCTTTTGATTTAGT
AGAACTTTCTTTAAGAATGTCTGCTATTTTAAGAAGGAGTAATGTAAGGGAATTTGAAGATGACAAATATATTATAAAAA
TTAAGGATTTAGAATTAAATTTAAAAGAGCACACTTTATATAAAGGAAAAGGTGAAATAACACTTACTCCAAAAGAATTT
GATATTTTATGTTTACTTGCTAGAAATAAAGGGAGAGTCTTTCCTTCAAGTGAGTTATATGAAAGAGTATGGGGACAAGA
ATTTTTAGAAAATGATAATAGTTTGTTAACACATATTAGAAATTTAAGAGAAAAATTAAATGATACAGTGAAGAATTCAA
AATATATCAAAACTGTTTGGGGAGTGGGTTATAAGATTGAAAAGGAAGCTTAG

Protein sequence :
MNYKILIVDDDKTIVEFLQIFLIKEGYEVKFSYNGEEALNKIENEKFDLILMDIMMPKIDGFEAIKIIRKLTNTLIIFLT
AKDNQQDKIKGFISGCDDYITKPFDLVELSLRMSAILRRSNVREFEDDKYIIKIKDLELNLKEHTLYKGKGEITLTPKEF
DILCLLARNKGRVFPSSELYERVWGQEFLENDNSLLTHIRNLREKLNDTVKNSKYIKTVWGVGYKIEKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 7e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_2765 YP_001788664.1 DNA-binding response regulator AM180355.1.gene1830. Protein 2e-41 48
CLK_2765 YP_001788664.1 DNA-binding response regulator DQ212986.1.gene4.p01 Protein 7e-43 48
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_005054.2598277.p0 Protein 3e-41 46
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_014475.1.orf0.gen Protein 3e-41 46
CLK_2765 YP_001788664.1 DNA-binding response regulator AF130997.1.orf0.gene Protein 3e-37 44
CLK_2765 YP_001788664.1 DNA-binding response regulator AF155139.2.orf0.gene Protein 5e-42 44
CLK_2765 YP_001788664.1 DNA-binding response regulator AF162694.1.orf4.gene Protein 2e-38 43
CLK_2765 YP_001788664.1 DNA-binding response regulator FJ349556.1.orf0.gene Protein 2e-45 43
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_012469.1.7685629. Protein 4e-36 43
CLK_2765 YP_001788664.1 DNA-binding response regulator EU250284.1.orf4.gene Protein 2e-39 42
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 9e-37 42
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 1e-36 42
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 1e-36 42
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 1e-36 42
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 1e-36 42
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 1e-36 42
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 9e-37 42
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 1e-36 42
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 1e-36 42
CLK_2765 YP_001788664.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 1e-36 42