Gene Information

Name : CLK_2645 (CLK_2645)
Accession : YP_001788567.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 3534101 - 3534850 bp
Length : 750 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGAGGTTAGAAATAAAGGATGTTAGTAAATCTTACATAAATGATAAGAAAAAAAATAAAGTTTTAGATAATGTAAGTTT
TAATATAGAAGAAGGAGAATTTGTAACATTACTAGGTCCATCTGGTTGTGGAAAAACAACACTTTTAACAATGATTGCAG
GTTTTCATAACTCAGATTCTGGTGAAATAATTTTAAATGATCAGAGGGTAATGAAGCCTGGTCCAGATAGAGGCTTTGTT
TTTCAAAATTATGCATTATTCCCATGGATGACTGTAAAAGATAATATAATGTATCCTATGAAACAACAAAAAATTCCTAA
AAGGGAAGCTATAGATAGGTTAAATTATTTATTAGAGATGTCCCAGCTAAAAGGAAAAGAAAATTTATACCCTAATCAAT
TATCAGGCGGTATGAAACAAAGAACCGCAGTGGTAAGAGCACTAGCTAGTAAACCAGAGGTATTACTTATGGATGAGCCT
TTGGGTGCTATAGATTTTCAAATGAGGCAAATGATGCAAGAAGAGTTAGAAAGTTTATGGTTAAAGGATAAAACTACAGT
TATAATGGTAACCCATGATGTTGACGAAGCAGTATACCTAAGTGATAGGGTAATTGTTTTTGCAGCTAAGGGAGGAAAAA
TTATAAAAGATATGAAATTTAGTTTGCCAAGGCCAAGAAATAGGGATAACCATAAATATCTAGAATTAAAAAAGGAATTA
ACTAACATATTAAAGGATTCATTAAGTTAA

Protein sequence :
MRLEIKDVSKSYINDKKKNKVLDNVSFNIEEGEFVTLLGPSGCGKTTLLTMIAGFHNSDSGEIILNDQRVMKPGPDRGFV
FQNYALFPWMTVKDNIMYPMKQQKIPKREAIDRLNYLLEMSQLKGKENLYPNQLSGGMKQRTAVVRALASKPEVLLMDEP
LGAIDFQMRQMMQEELESLWLKDKTTVIMVTHDVDEAVYLSDRVIVFAAKGGKIIKDMKFSLPRPRNRDNHKYLELKKEL
TNILKDSLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-25 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-26 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-41 41