Gene Information

Name : CLK_2565 (CLK_2565)
Accession : YP_001788487.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3446424 - 3447080 bp
Length : 657 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGTTAAGTATAAATAAACTTTATAGAACATATGGAAGTGGAGAAACAAAGGTAGATGCTATAAAAAACATAAATTTAAC
CATTAATCAGGGAGAATTTGTGGCGATAGTAGGGGCTAGTGGATCGGGAAAGAGCACTCTTCTTCATGCTATGGCCGGCT
TAGATAAGCCTACAGGAGGTAATATAATTATTGATAATCAAGATATATATGCTTTAGATGTAGATAGTCTTGCAGCTTTT
AGAAGAAAAAAAATAGGATTTGTTTTTCAGTTTTTTAATTTAATTCCTGTGTTAACATTAGAGGAAAATATACAAGTTCC
TATACTATTAGATCATGAAAAAATAGATAAAGATTATCTAAATGAGTTATTAGATATATTAGATTTAAGAGGTAGAAGAG
ATCATCTTCCATCACAGCTCTCTGGAGGGCAACAACAGCGCGCTGCTATAGCAAGGGCATTAATAAACAAGCCTTCAATT
ATATTTGCAGATGAGCCTACAGGAAATCTTGATAAAAAAAATTCAAAAGAGGTAATGGATTTACTAAAATTATCCTGCAA
AAAGTATAAACAAACACTAGTTATTGTAACTCATGATTTAGAAATAGCTTCAGAAGCAGATAGGATAATTACTATATCTG
ATGGAGAGATCAAGTGA

Protein sequence : 
MLSINKLYRTYGSGETKVDAIKNINLTINQGEFVAIVGASGSGKSTLLHAMAGLDKPTGGNIIIDNQDIYALDVDSLAAF
RRKKIGFVFQFFNLIPVLTLEENIQVPILLDHEKIDKDYLNELLDILDLRGRRDHLPSQLSGGQQQRAAIARALINKPSI
IFADEPTGNLDKKNSKEVMDLLKLSCKKYKQTLVIVTHDLEIASEADRIITISDGEIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-32 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_2565 YP_001788487.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-48 59
CLK_2565 YP_001788487.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 9e-46 52
CLK_2565 YP_001788487.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-33 45
CLK_2565 YP_001788487.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-28 41