Gene Information

Name : CLK_3461 (CLK_3461)
Accession : YP_001785610.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 329430 - 330200 bp
Length : 771 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGTCAATTTTAAAAGTTGAAAATATAACAAAAATATATGGTGGAAAAAAGGGTGGAATGAAATTCAAAGCTCTAGATAA
ATTTAGTTTAGAAATTGAAAAAGGGGAATTCGTGGGAGTAATGGGACCCTCAGGTAGTGGTAAAACCACATTGTTAAATA
TAATGGCAACAATAGATACACCTACATCAGGAGAACTCTTTATAAATGGTACAAATCCTACAAAACTAAATGAGAAAAAT
ATTGCTCTATTTAGAAGAAAAGAATTAGGTTTTATATTTCAAGATTTTAATCTCTTAGATTCTTTATCTATTAAGGAAAA
TATAATATTACCACTTGTATTAGAAAAGGTTAAAGTACGTGAAATAGAAAAAAGAGTAGATGATATAGCAAATCTTTTAA
ATATTAAAGATATTTTAAATAAAAAGCCTTATGAAATTTCAGGAGGGCAGCAGCAAAGAGCAGCATGTGCTAGAGCACTT
ATTCATAATCCTTCTATAATCTTAGCGGATGAACCTACAGGAAATCTTGATTCTAAAGCATCACAGGATGTTATGGAAAC
TTTAACAAATTTAAATACTAAAAAAGAAGCCACTATAATGATGGTTACTCATGATCCTTTTTCTGCAAGTTTTTGCAAAA
GAATAATTATGATTAAGGATGGAAAATACTTCTTAGAAATTGTGAATGGAGGAAATAGGCAAGCATTTTTTAAAGAAATT
ATGGATTCTCTTTCACTTTTAGGAAGTAGATCAAATAATTATACACTGTAG

Protein sequence : 
MSILKVENITKIYGGKKGGMKFKALDKFSLEIEKGEFVGVMGPSGSGKTTLLNIMATIDTPTSGELFINGTNPTKLNEKN
IALFRRKELGFIFQDFNLLDSLSIKENIILPLVLEKVKVREIEKRVDDIANLLNIKDILNKKPYEISGGQQQRAACARAL
IHNPSIILADEPTGNLDSKASQDVMETLTNLNTKKEATIMMVTHDPFSASFCKRIIMIKDGKYFLEIVNGGNRQAFFKEI
MDSLSLLGSRSNNYTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_3461 YP_001785610.1 peptide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-37 49
CLK_3461 YP_001785610.1 peptide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-36 44
CLK_3461 YP_001785610.1 peptide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-37 44
CLK_3461 YP_001785610.1 peptide ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-29 41