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Name : ribD (CLK_2263) Accession : YP_001788192.1 Strain : Clostridium botulinum Loch Maree Genome accession: NC_010520 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 3117060 - 3118157 bp Length : 1098 bp Strand : - Note : identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGGAAGATTATAATTTTTATATGGAAAAAGCCTTAAAACTAGCTGAAAGAGGCGAGGGTAAAGTTAATCCTAATCCTAA AGTAGGAGCTATAGTAGTTAAAAACAACAAAATAATTGGAGAAGGTTATCACAAATATTTTGGAGGACCTCATGCAGAAG TTTATGCTCTTAGAGAAGCTAGTGAAAAGGCTAAAGGAGCCACTATGTATATTACATTAGAGCCCTGTTCACATTATGGT AAAACGCCTCCTTGTGCAGAGTATATAGTAAAGATGGGAATATCTAAGGCTATTATAGCTATGAAAGATCCCAATCCTTT AGTTGAAGGTAGAGGAATAGATATTTTAAAGCAAAATGGAATAGAAGTTGTAACAGAGATTATGGAAAAAGAAAGTAAAA AATTAAATGAAGTCTTTATAAAATACATAACTAAAAAGAAACCTTTTGTAGTTTTAAAAACTGCTTCTACCTTAGATGGT AAGATTGCTACAAGAACAGGAGAATCAAAATGGATAACAGGAGAAGAGGCAAGACATAAAGTACAGCAAATAAGAAATGA TTTATCCGGAATAATGGTAGGCATAGATACAGTTATAAAAGATGATCCTCTTTTAACTACAAGAATAGAAGGAGGAAGAA GTCCGAAGGCAATAATAGTAGATTCCAATCTTAGAATTCCATTAGAATCTAAAATATTAGAAACTCTTAGCAAAAGAGCT ATTTATATAGCCACAACTAAAAAACATAAGAATCCATCAAAAAAGAATGCTTTAGAAAATTTAGGGGCTAAGGTTTTAGA GTTTGAAGAAAATCAAGAGGGAAAAGTTCCATTAAATAAATTAATGCAATATTTAGGATCAGAGGGAGTGGATAGTATTC TTTTAGAGGGAGGTAGCACATTAAATTTTTCTGCACTAAAAGAGGGGATAGTAGATAAGATTATGTGTTTTATAGCACCT AAAATAATGGGTGGACAGGATTCAAAGACGATGATAGGTGGAACTGGGATAGAAAGTTTAAAAGATATATTTAATTTACA AAACTTAAAATTTGAAAAAATAGGGCAGGATATACTTATTGAAGGCTATGTATATTAG Protein sequence : MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFGGPHAEVYALREASEKAKGATMYITLEPCSHYG KTPPCAEYIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGIEVVTEIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDG KIATRTGESKWITGEEARHKVQQIRNDLSGIMVGIDTVIKDDPLLTTRIEGGRSPKAIIVDSNLRIPLESKILETLSKRA IYIATTKKHKNPSKKNALENLGAKVLEFEENQEGKVPLNKLMQYLGSEGVDSILLEGGSTLNFSALKEGIVDKIMCFIAP KIMGGQDSKTMIGGTGIESLKDIFNLQNLKFEKIGQDILIEGYVY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 3e-58 | 42 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 3e-58 | 42 |
