|
Name : nagE (CLK_2226) Accession : YP_001788155.1 Strain : Clostridium botulinum Loch Maree Genome accession: NC_010520 Putative virulence/resistance : Unknown Product : PTS system N-acetylglucosamine-specific transporter subunit IIBC Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1263 EC number : 2.7.1.69 Position : 3075075 - 3076517 bp Length : 1443 bp Strand : + Note : identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01998 DNA sequence : ATGGCAAAAAACAGTAAATTTTTATCAAAAATTCAAAGGCTAGGTAAATCCCTCATGACTCCTATTGCTGTATTACCAGC AGCTGCTTTACTACTTAGGTTAGGTCAGCCCGATATCTGGAGTTGGGTTGGTTCTTTACCAAATGGTATTCCTTGGATGT CTTCAGCCGGTTCCGCAATTTTTGATAACCTATCCCTTATTTTTGCTATAGGTATAGCTGTAGGATTAGCAGAGGAAAAT AATGGTGTTGCTGCAATTTCTGCTACTGTTGGCTACCTTGTGCTAACAAATGTTTCTTTAAAATTTGATGATACAATTAA TATGGGAGTTCTATCCGGTATAATTGTAGGTATATTATCTGCATCGCTTTACAATAAGTATAAAAATATTAAACTTCCAG ATTATCTAGGTTTCTTTGGAGGAAAACGTTTTGTTCCAATTATAACTTCTTTATACTCCTTAATTTTAGGTATTGTATCA GGATTTGTATGGCCTCCAATTCAAAATGTTATAAATAATTTTGGTAATGCAGTTGCAGGAGCTGGAGCTGTTGGAGCATT TTTCTTTGGATTATTTAACAGACTTTTGATTCCAACTGGATTACACCATATTATGAATACAATATTTTGGTTCCAATTTG GTACATTTAAAAATCCAGCAGGTAAAATTGCTAATGGAGATTTAAATAGGTTTTTCGCTGGAGATCCTACTGCAGGAACT TATATGACTGGTTTTTTTGTAATAATGATGTTTGCTCTTCCTGCAGCCTGTTTTGCTATGGTCAAAGCTGCTAGGGAAGA AAATAAAAAAGCAGTTTCAGGTATGCTTTTAGGTTTAGCATTTACTGCATTCCTTACAGGAGTTACTGAACCAATAGAAT TTACTTTTATGTTTATCTCACCTGTTCTTTATGCAATACATGCTTTGTTAACTGGTATAGCCCTAGCGCTTACATCAGCC TTAGGAATAAAATGTGGATTTGGATTTTCTGCAAGTCTTATAGATTATGGTCTTAATTTTGGTATATCAACTAAACCACT ATTTATAATTCCCATAGGTTTAATATTTGCAGCAATATACTACTTTTTATTCTTATTCTTTATAAAAAAATTCAATTTAC CTACACCAGGAAGGGAATTAGATTCAGAAGTTAATACAAATATCAATGTTGATACGCCTAAAAAAAGTGGACATTCTAAA TTAGAAGATAAAGCTAAAGGAATACTAAACGCTATCGGTAATTCTGAAAATATTGATTCTATAGATGCTTGTGTAACTAG AATAAGACTTGTTGTTTTTGATGGGAGCAAAATAAATGAAGCTAAACTTAAAGAATTAGGCGCTAATGGAATTATGAAGC TTGATGATAAAAATTTCCAAATAGTAGTTGGTACTATCGCTGATCCTTTAGTATCTCAAATGAAACTATTAATGAAAAAA TAA Protein sequence : MAKNSKFLSKIQRLGKSLMTPIAVLPAAALLLRLGQPDIWSWVGSLPNGIPWMSSAGSAIFDNLSLIFAIGIAVGLAEEN NGVAAISATVGYLVLTNVSLKFDDTINMGVLSGIIVGILSASLYNKYKNIKLPDYLGFFGGKRFVPIITSLYSLILGIVS GFVWPPIQNVINNFGNAVAGAGAVGAFFFGLFNRLLIPTGLHHIMNTIFWFQFGTFKNPAGKIANGDLNRFFAGDPTAGT YMTGFFVIMMFALPAACFAMVKAAREENKKAVSGMLLGLAFTAFLTGVTEPIEFTFMFISPVLYAIHALLTGIALALTSA LGIKCGFGFSASLIDYGLNFGISTKPLFIIPIGLIFAAIYYFLFLFFIKKFNLPTPGRELDSEVNTNINVDTPKKSGHSK LEDKAKGILNAIGNSENIDSIDACVTRIRLVVFDGSKINEAKLKELGANGIMKLDDKNFQIVVGTIADPLVSQMKLLMKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0067 | AAM75272.1 | EF0067 | Not tested | Not named | Protein | 2e-55 | 41 |
