Gene Information

Name : CLK_2074 (CLK_2074)
Accession : YP_001788005.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Virulence
Product : capsular exopolysaccharide family protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 2897542 - 2898237 bp
Length : 696 bp
Strand : -
Note : identified by match to protein family HMM TIGR01007

DNA sequence : 
TTGGATAGAAACTTAAATTTGATAACTATAAAAGAACCTAAGTCCCCAATATCCGAAGCATATAGGACATTAAGAACTAA
TATACAATTTTCATCCTTTGATGAAAAAATAAGTGTAATTTTTGTGACTAGTTCTACTCCAGGGGAGGGTAAATCTACGA
CTTCAGCGAATTTAGCCATAACTATGGCACAAAATGGTTCAGAAACTATTTTAGTAGATTGTGATCTTAGAAAACCTAAT
GTACATAAGTTATTTAAGCTATCTAATACAAGGGGATTATCTAATTTGCTTATAGAAGATAATGGTATAGATAAGGTAAT
ACAACAAAGCGGTATAGAAAATCTACATATTCTAACCTCAGGAATAAAGCCACCTAATCCCTCAGAGTTATTATCCTCTA
AAAAAATGAAAAAATTTATAGATATGAGTAAAAAACATTATGATTATATAATATTAGATACTCCACCTGTAGGAGTGGTT
ACAGATGCTCAATTAGTATCCCAGTATTCAGATGGAGGAATATTAGTTGCAGCTTATGGACAGGTTGAAAGGGAATTAGC
TATAAGAGCAAAACAACTTTTACAAAAAGTCAATGCAAAAATACTAGGGGTAGTATTAAATAAAGTAGATACAAACTCTG
GTAATGAATATAAGTATTATAATTATTATTATGAAGAAGATGCAAAAAAGAAATAG

Protein sequence : 
MDRNLNLITIKEPKSPISEAYRTLRTNIQFSSFDEKISVIFVTSSTPGEGKSTTSANLAITMAQNGSETILVDCDLRKPN
VHKLFKLSNTRGLSNLLIEDNGIDKVIQQSGIENLHILTSGIKPPNPSELLSSKKMKKFIDMSKKHYDYIILDTPPVGVV
TDAQLVSQYSDGGILVAAYGQVERELAIRAKQLLQKVNAKILGVVLNKVDTNSGNEYKYYNYYYEEDAKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-34 43
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-32 42
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 6e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_2074 YP_001788005.1 capsular exopolysaccharide family protein VFG1298 Protein 7e-31 43
CLK_2074 YP_001788005.1 capsular exopolysaccharide family protein VFG1368 Protein 3e-24 43