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Name : rplS (CLK_1821) Accession : YP_001787756.1 Strain : Clostridium botulinum Loch Maree Genome accession: NC_010520 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 2640899 - 2641243 bp Length : 345 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGTTAGAAGTTATAAAAGCTATAGAAGCAGAACAAGTAAGAAATGATTTACCAGAGTTCCATGTAGGAGATACTGTAAA AGTTCACCAAAAAATTAAAGAAGGAACTAGAGAAAGAGTTCAAATATTTGAAGGAACAGTTCTAAAAAGACAAAATGGTG GAGCAAGAGAAACTTTCACAGTAAGAAGAGTTGCTTACAATGTAGCAGTTGAAAAAACTTTCCCAGTTAATTCACCATTA ATTGAAAAGATCCAAGTTGTAAGAAAAGGTAAAGTAAGAAGAGCTAAACTATACTACTTAAGAGATAGAGTAGGTAAAGC AGCAAAAGTTAAAGAAAGAATATAA Protein sequence : MLEVIKAIEAEQVRNDLPEFHVGDTVKVHQKIKEGTRERVQIFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPL IEKIQVVRKGKVRRAKLYYLRDRVGKAAKVKERI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-29 | 58 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 4e-24 | 48 |
