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Name : CLK_3354 (CLK_3354) Accession : YP_001785504.1 Strain : Clostridium botulinum Loch Maree Genome accession: NC_010520 Putative virulence/resistance : Unknown Product : RNA-binding protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 206081 - 208237 bp Length : 2157 bp Strand : + Note : identified by match to protein family HMM PF00575 DNA sequence : ATGAACAATATAAACAGTATTTTATCAAAAGAACTTAACATATCCATTAAATATATAGATGCAGTTATAGATTTATTAGA TCAGGGAAATACAGTACCTTTTATAGCAAGATATAGAAAAGAAGTAACAGGAGGTATGAGTGACGAAACGCTTAGAGAGC TCTTTGAAAGGCTTACATATTTAAGAAATTTAAGTTCCAAAAAAGAGGATGTTATAAGACTCATAGAGGAGCAGGGAAAA CTTACAGAAGAGCTTAAAACATCTATAATTAATTGTAAAACTGTTACAGAGGTAGAGGATTTATATAGACCTTATAGACC AAAGAGAAGGACAAGAGCTACTATAGCAGAAGAAAAAGGATTAAAACCTTTAGCAGGAATAATATTAGAAGGTAATTTTA AAGAGGATATAAAAGTATATGCTAGTAAATTCGTAAATGAAGAAAAAGAAGTAAAGACTATCGAAGAAGCTCTACAGGGT GCTATGGATATAATAAGCGAAGTTATATCTGATGAAGCGGAATACAGAAAGTGGATAAGAAATTTTGTTTTTAATGAAGG AGTAATAGAAACTAAAGGTGAAAGCATGGAACCTACTCCTTACGAAATGTATTATGATTATAAAGAAAATGTAAAAAATA TTCCTCCTCATCGAATACTAGCTATAAATAGAGGAGAAAAAGAAAAAATATTAACAGCAAAAGTTACCTGTAATGAAGAT AAAATAATAGATTATTTAAAAAGTAGATCATTAAAAGGAAATAAGGAAACGGATGCATATATAGAGGAGTCTGTTAAAGA TTCTTTAAAAAGATTAATATATCCATCTATAGAAAGAGAGATAAGATCAGAGCTAACAGAAAAAGGTGAAGAAGGAGCAA TAAAAATATTTAAAGAAAATTTAAAGGCTCTTTTGATGCAAGCACCCATAAAGGATAAAGTAGTTTTAGGATATGACCCA GGCTTTAGGACAGGATGTAAGATAGCAGTATTAGATGAAACAGGAAAATTATTAGATACAGCTACGGTTTATGCTACAGC ACCACAAAATGACGTAGAAGGTTCTATAAAAATATTAAAAGAATTAATATACAAATATGATGTTGATGTAATATCTTTAG GAAATGGAACAGCTAGTAGAGAATCAGAAGAAGTTATATCAAAAATGCTTAAAGAAATAAAAGAAGAAAAGGGTAAAGAT ATATATTATGTTATAGTATCTGAAGCTGGAGCTTCTGTTTATTCTGCATCAAAATTAGCTACGGAAGAATATCCAGATAT AAATGTTTCTTTAAGAGGAGCTATATCTATAGGGAGAAGACTTCAAGATCCTCTAGCAGAACTTGTAAAGATAGATCCTA AATCTATAGGGGTGGGGCAATATCAACATGATGTATCTCAAAAAAAATTAGATGAATCACTAAAAGGTGTAGTAGAAGAT TGTGTTAATGCTGTAGGAGTAGACTTAAATACTGCAACACCATCGCTTTTATCCTATATTTCAGGCATTAATAGTTCCAT AGCTAAAAATATAGTAGCCTATAGAGAAGAAGTAGGAAAATTTAAGAATAGAAAAGAATTATTAAAAGTAAAAAGGTTAG GACAAAAAGCCTTTGAACAATGTGCAGGTTTTCTTAGAGTTATGGAAAGTAAAGAACCTTTAGATAATACAGGAGTTCAT CCAGAGTCTTATGAGGGAACTAAGAAATTTTTAAGCTTGTTACAATATGATACAAAAGATGTAAAAAATAATAAATTACA GGATATAGATGATAGAGTTAATAATATAGGTCTAGATGATATATGTAATAAAATAGATATAGGGAAACCTACACTATTAG ATATTATAAAAGAAATAAAAAAACCAGGAAGAGATCCAAGAGAAGATTTACCTAAGCCTATATTAAAGACAGGGATTGTT GATATAACTCAATTAAAGCCAGACATGGTTCTAATGGGTACTGTTAGGAATGTAGCTGATTTTGGAGCCTTTGTAGATAT AGGAGTTCATCAAGATGGCTTAGTACATATAAGTCAACTTTCAGATAGCTTTGTAAAACATCCTTTAGATATAGTAAAAG TAGGAGATATAGTAGAAGTTAGAATATTAGAAGTAGACCGAAAGAGAAACAGAATTTCCTTAAGTATGAAAAAGTAA Protein sequence : MNNINSILSKELNISIKYIDAVIDLLDQGNTVPFIARYRKEVTGGMSDETLRELFERLTYLRNLSSKKEDVIRLIEEQGK LTEELKTSIINCKTVTEVEDLYRPYRPKRRTRATIAEEKGLKPLAGIILEGNFKEDIKVYASKFVNEEKEVKTIEEALQG AMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTPYEMYYDYKENVKNIPPHRILAINRGEKEKILTAKVTCNED KIIDYLKSRSLKGNKETDAYIEESVKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAPIKDKVVLGYDP GFRTGCKIAVLDETGKLLDTATVYATAPQNDVEGSIKILKELIYKYDVDVISLGNGTASRESEEVISKMLKEIKEEKGKD IYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLDESLKGVVED CVNAVGVDLNTATPSLLSYISGINSSIAKNIVAYREEVGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEPLDNTGVH PESYEGTKKFLSLLQYDTKDVKNNKLQDIDDRVNNIGLDDICNKIDIGKPTLLDIIKEIKKPGRDPREDLPKPILKTGIV DITQLKPDMVLMGTVRNVADFGAFVDIGVHQDGLVHISQLSDSFVKHPLDIVKVGDIVEVRILEVDRKRNRISLSMKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 7e-154 | 48 |
