Gene Information

Name : CLK_1349 (CLK_1349)
Accession : YP_001787287.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Unknown
Product : single-strand binding protein family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2136561 - 2136971 bp
Length : 411 bp
Strand : -
Note : identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621

DNA sequence :
ATGAATAAAATACAACTTGTTGGGAGATTAACTAAAGATCCAGAGTTAACTTTTGCTCCTGGAACAGGAACAGCAGTAAC
AAAATTTACATTAGCAGTAAACAGACCGCAATTTGACAAGTCCAAGCAACAGGAAGCAGACTTTATTCCTTGTGTATGTT
TCGGGAAAAGAGCTGAAGCGATAGCAAATTATGTTCAAAAGGGACATAGGTTTGGACTTAGCGGGCGATTACAAATTAAT
AAATATGTGGACAAAGAAGGTAACAATAGATGGAGCACAGATGTAGTAGTAGAAGATTTTGAGTTTTTACAGGATAAAGG
GGCAAGGATTAATGAAAGTCAATCTAACGAATCATCTGTTGACTATGAGAAAGATTTAACTCCTGTAGATGATGGAGATA
TTCCGTTCTAG

Protein sequence :
MNKIQLVGRLTKDPELTFAPGTGTAVTKFTLAVNRPQFDKSKQQEADFIPCVCFGKRAEAIANYVQKGHRFGLSGRLQIN
KYVDKEGNNRWSTDVVVEDFEFLQDKGARINESQSNESSVDYEKDLTPVDDGDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 2e-17 49
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 3e-17 48
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-17 48
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 7e-17 48
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 1e-17 44
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 8e-18 44
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 4e-16 44
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 1e-23 42