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Name : serS (CLK_3156) Accession : YP_001785350.1 Strain : Clostridium botulinum Loch Maree Genome accession: NC_010520 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 22336 - 23616 bp Length : 1281 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATTTAAAAAGAATAAGAAATAATTCAAATGAAATAAAAGAAGCATTAAACAATAGAGGAGAAAAGTTTGATGT AACTGTAATTGATGAAGTCTTAAAATTAGATGAAGAAAGAAGAAATATTTTAGTTAAAGTTGAGGTTTTAAAAAGTAAGA GAAATCAAGTTTCTTCTGAAGTTCCTAAACTAAAAAAAGAAGGAAAAGATGTATCTAATATAGTAGCTGAAATGAAAAAT TTATCAGAAGAAATAAAAGGGTTTGATACTACTTTAGCTAAAATAGATGAAAAAATACAATATATAATGCTTAGAATACC TAATATACCAAACCCACAAGTTCCAGATGGAGAAACAGATGAGGATAATATAGAAATAAGAAATTGGTCAGAACCAACAA AATTTGATTTTGAGCCTAAAGCACATTGGGATATAGGTTCAAATTTAAATATTCTTGATTTTGAAAGAGCTGGAAAAGTA ACAGGATCAAGATTTACTTTTTATAAAGGATTAGGAGCTAGATTAGAAAGATCATTAATATCCTATTTTCTAGATACTCA TACAGAGAAGCATGGATACACTGAAATATTACCACCTTATATGGTGAATAGAACAAGTATGATAGGAACAGGACAATTAC CTAAATTTGAAGAAGATGCTTTTAAAATTTCAGAGGATGATTACTTCTTAATACCAACTGCAGAGGTTCCTGTAACTAAT TTATACAGAGATGAAATCTTAAAAGGTGATGAATTACCATTAAAACATGTAGCTTATAGTGCTTGTTTTAGATCAGAAGC CGGTTCAGCAGGTAGAGATACAAGAGGTCTTGTTAGACAGCATCAATTCAATAAAGTAGAGCTTGTTAAATTTACAAAAC CAGAACAGTCTTATGAAGAATTAGAAAAATTAACTAATGATGCTGAAACAGTATTAAAAGAGTTAGGTATTCCATATAGG GTTGTAAGAATATGTAAAGGTGATTTAGGATTTACAGCTGCATTAAAATATGATTTAGAAGTTTGGATGCCAAGTTACAA TAGATATGTTGAAATATCAAGCTGTAGTAACTTTGAAGACTTCCAAGCAAGACGTGCTAATATAAGATATAAAGAAGATG CAAAAGCAAAACCACAATATGTTCATACATTAAATGGATCAGGAGTTGCTATTGGAAGAACTGTTGCAGCTATACTTGAA AACTATCAAAATGAAGATGGATCAGTTACAATACCAGAAGTGTTAAGACCTTATATGGGAGGAAAAGAAGCAATAAAATA G Protein sequence : MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSEVPKLKKEGKDVSNIVAEMKN LSEEIKGFDTTLAKIDEKIQYIMLRIPNIPNPQVPDGETDEDNIEIRNWSEPTKFDFEPKAHWDIGSNLNILDFERAGKV TGSRFTFYKGLGARLERSLISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPVTN LYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSYEELEKLTNDAETVLKELGIPYR VVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNFEDFQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAILE NYQNEDGSVTIPEVLRPYMGGKEAIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-129 | 61 |
