|
Name : pdp (CLK_1249) Accession : YP_001787189.1 Strain : Clostridium botulinum Loch Maree Genome accession: NC_010520 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 2050826 - 2052130 bp Length : 1305 bp Strand : - Note : identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644 DNA sequence : ATGAGAATGTATGATTTGATCCTAAAGAAAAGAAATGGCGGAGAGTTAAGCAAAGAAGAAATAGATTATTTTATTTTAGA ATATACTAATGGTAATGTCCCAGATTATCAAGCTTCAGCCCTTTTAATGGCTATATACTTTCAAAAAATGAAAAGAAGAG AAACTGTAGATTTGACTATGGCTATGGTTAACTCTGGAGATATATTGGATTTATCAAAAATACAGGGTATAAAAGTTGAT AAACATAGTACTGGTGGAGTTGGGGATACTACTACCTTAGTTTTGGCGCCTATGGTAGCAGCCTTAGGTATACCTGTAGC TAAAATGTCTGGTAGAGGTTTAGGTCATACTGGTGGAACTATAGATAAATTAGAATCTTTTAAAGGTTTTTCAGTAAATA TGACAGAGGATAAATTTATAAATAACGTTAACAATATTAAAATAGCTGTAGGAGCTCAAACAGCAGATTTAGCTCCAGCG GATAAAAAATTATATGCATTAAGAGATGTTACTGCTACAGTAGACAATATTTCTTTAATAGCTTCTAGTATAATGAGCAA AAAAATAGCTGCAGGAGCTAATGCCATAGTTTTAGATGTAAAGGTGGGAGAAGGAGCCTTTATGAAAACTTCGGAAACTG CAAAAGAGTTAGCGGAGGAAATGGTTAATATAGGTAAAAGTGTAGGTAGAAATACTGTGGCTATATTATCAGATATGGAT CAACCTTTAGGCTATGCTATAGGAAATGCTTTAGAAGTAAAAGAAGCTATAGATACACTAAAAGGCAAAGGCCCTAAGGA TTTATTAGAATTATGTTTAACCTTAGGAAGTAATATGGTTATTTTAGCACAAAAAGCAAATACTATAGAGGAAGCAAGAA AAATGCTTTTAAGTACTATAGAAAAAGGATTAGCTATAGAAAAATTAAAAGAATTTATTAGATCTCAAGGCGGAGATGAT ACTTTAGTAGACAATACAAAAAAATTACCTAAGGCAGAATATATAATTCCTGTAATTTGTGATAGAAATGGATATATAAA TAAAATTCATGCCCAAAATATAGGGATAATAGCATCAGAATTAGGAGCAGGAAGGGTTACAAAGGATAGCATTATAGACT TAGCAGTAGGTATAGTTTTAAACAAGAAGAGATCAGATAAAGTTAAAAAAGGAGATATAATAGCTTATATTCATGCTAAT GATAAAATAAAAGGAGAAAAGGCTGCAAAAGATATATTAAATAATTATGTTATAGAAGAAGAGTTAAAAGAAGAATTACC TTTAATATATGATACAGTAAAATAG Protein sequence : MRMYDLILKKRNGGELSKEEIDYFILEYTNGNVPDYQASALLMAIYFQKMKRRETVDLTMAMVNSGDILDLSKIQGIKVD KHSTGGVGDTTTLVLAPMVAALGIPVAKMSGRGLGHTGGTIDKLESFKGFSVNMTEDKFINNVNNIKIAVGAQTADLAPA DKKLYALRDVTATVDNISLIASSIMSKKIAAGANAIVLDVKVGEGAFMKTSETAKELAEEMVNIGKSVGRNTVAILSDMD QPLGYAIGNALEVKEAIDTLKGKGPKDLLELCLTLGSNMVILAQKANTIEEARKMLLSTIEKGLAIEKLKEFIRSQGGDD TLVDNTKKLPKAEYIIPVICDRNGYINKIHAQNIGIIASELGAGRVTKDSIIDLAVGIVLNKKRSDKVKKGDIIAYIHAN DKIKGEKAAKDILNNYVIEEELKEELPLIYDTVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-74 | 45 |
