|
Name : CLK_1052 (CLK_1052) Accession : YP_001786994.1 Strain : Clostridium botulinum Loch Maree Genome accession: NC_010520 Putative virulence/resistance : Resistance Product : antibiotic transporter response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1816056 - 1816715 bp Length : 660 bp Strand : + Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486 DNA sequence : ATGTCGAAAATACTTGTAATTGATGATGAAGAAGATATTTTAGCCCTTGTTAAAAATGTTCTTTCCAAGGATAATCACTT AGTAACTACAGTAAAGAAAGCAAAAGATATTCCGCTAAATGATTTTGTAAAATTTGATCTGATTTTATTAGATGTAATGA TGCCTGATATTGATGGCTTTACTTTGTGTAAGGAAATTAGAGAGATGGTAGACTGTCCAATTCTTTTTTTAACAGCAAAA ACTATGGAAAGTGACATTATGTTTGGATTAGGAATTGGTGGAGATGATTATATAACAAAACCTTTTGGAGTAGGAGAATT AAGGGCTAGAGTAAATGCTCATTTACGCAGGGAACATCGTGAAAAACGTCATATTTTTGTAGCTTCAGATATTATATTTA ATCTATCCAGTAAGGAAATTAAAATAGGCGATGTAAAGGTGGCATTCACAAAGGGAGAATATGCTATATGTGAATACCTT GCAAGAAATTCAAGGCAGGTGTTTTCTAAAGAACAAATATATGAAGCGGTTTATGGGTATGATGGAGAAAGTGATAGCTC TGCTATTACAGAGCATATTAAAAATATTAGAGCTAAGTTAAAAGTTTTTGATATGTCACCAATAGAAACGGTATGGGGGA TTGGTTACAAATGGGTATAA Protein sequence : MSKILVIDDEEDILALVKNVLSKDNHLVTTVKKAKDIPLNDFVKFDLILLDVMMPDIDGFTLCKEIREMVDCPILFLTAK TMESDIMFGLGIGGDDYITKPFGVGELRARVNAHLRREHREKRHIFVASDIIFNLSSKEIKIGDVKVAFTKGEYAICEYL ARNSRQVFSKEQIYEAVYGYDGESDSSAITEHIKNIRAKLKVFDMSPIETVWGIGYKWV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0907 | YP_001198273.1 | NisR | Not tested | 89K | Protein | 2e-40 | 47 |
| SSU98_0912 | YP_001200470.1 | NisR | Not tested | 89K | Protein | 1e-25 | 47 |
| nisR2 | YP_006309922.1 | NisR | Not tested | FWisland_1 | Protein | 2e-39 | 44 |
| nisR | YP_006309898.1 | NisR | Not tested | FWisland_1 | Protein | 2e-43 | 42 |
