Gene Information

Name : CLK_1049 (CLK_1049)
Accession : YP_001786991.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Virulence
Product : antibiotic ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1813752 - 1814459 bp
Length : 708 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGGAAAAATATATTTTACAAACAAAAGATATTTGTAAAGTTTTTAAAGGTCAGCATGCAGTAAACAATATTTCAATTAC
AGTGAGAGAGAATTCTGTGTACGGATTATTAGGGCCTAATGGGGCAGGAAAATCTACTATGTTAAAAATGCTAACAGGAA
TGTTGCGGCCTACATCTGGACAGATTATATTTGATAATCATCATTGGACTAGGAAGGATTTAGTGAGTATTGGTGCTCTT
ATTGAAGCTCCACCCCTTTATGAAAATTTAACTGCAAGGGAAAATTTAAAAGTACGTACTACTCTTTTAGGATTAAAAGA
TTCACGGATTGATGAGGTATTAAAAATTGTTGATTTGACTAATACAGGTAAAAAAACTGCTGGTAAGTTTTCGATGGGTA
TGAAACAGCGTTTAGGAATTGCCATTGCTCTACTTAACAATCCTAGACTATTAATATTAGATGAACCAACAAATGGTCTT
GATCCTATTGGTATTCAAGAGTTACGCGAATTAATTCGATCATTTCCAAAGCAAGGAATAACAGTTATTTTATCTAGTCA
TATTTTAGCAGAGGTTCAGCTCATTGCAGACCACATTGGAATTATAAGTAATGGGATCTTAGGATATGAAGCAAAAATTA
ATCCTTCAGAAAATTTAGAAACACTTTTCACAGAAGTAGTAAGAAAGAATAAAAAAAGGAGGGCATAA

Protein sequence :
MEKYILQTKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGQIIFDNHHWTRKDLVSIGAL
IEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLTNTGKKTAGKFSMGMKQRLGIAIALLNNPRLLILDEPTNGL
DPIGIQELRELIRSFPKQGITVILSSHILAEVQLIADHIGIISNGILGYEAKINPSENLETLFTEVVRKNKKRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 3e-44 51
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 3e-44 51
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 3e-44 51
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 4e-44 51
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 2e-43 51
cdd4 CAA63569.1 - Not tested PaLoc Protein 4e-44 50
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 3e-41 44
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 2e-41 44
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 4e-32 44
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 8e-31 41