Gene Information

Name : rbsK (CLK_1040)
Accession : YP_001786982.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Unknown
Product : ribokinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0524
EC number : 2.7.1.15
Position : 1804259 - 1805161 bp
Length : 903 bp
Strand : +
Note : identified by match to protein family HMM PF00294; match to protein family HMM TIGR02152

DNA sequence :
ATGGATATTGCAGTTATTGGTTCAAATATGGTAGATTTGATAAGTTATATTAATAGAATGCCTAAAGAAGGTGAAACTCT
AGAAGCACCAGATTTTAAAATGGGATGTGGGGGTAAGGGGGCAAACCAAGCCGTTGCAGCTGCAAGATTAAGATCAGATG
TTATGATGGTAAGTAAGGTTGGAGATGATTTATTTGGACAAAACACTATTAAAAATTTTAAAAACAATGGTGTAAATACA
GGTTTTGTAACTGTTCAAAAAAATCAAGCTAGTGGAGTTGCACCCATTTTTGTTGATAGGGAATCTAGAAATAGTATTTT
AATTATTAAAGGGGCCAATAAAAATTTATCTCCTACAGATATAGATGATGCAAGTGAAGAATTGAAAAAGTGTTCTTTAA
TTATTTTACAATTGGAAATTGAATTAGAAACTGTTTATTACGCTATAGATTTTGCTAATAAAAATAATATCCCTGTATTG
CTAAATCCTGCGCCTGCTATAAAAGAACTTGATTTCAATTATGTTTATAAATGCGATTTTTTTGTTCCAAATGAAACAGA
ATTAGAGATTTTAACAAATAAGCCTGTAAATACAATAGAGGGCATAAGAAAAGCTGCTCATTTAATTGGGGATAAAGGTG
TTAAAAATGTAATTGTTACAATGGGTAGTAAAGGGTTGCTGTGGATTAATAAAGATGAAGAACATTTTATAAAAGCACGT
AAAGTTGATGCTGTAGACACCACTGGTGCTGGTGATGGATTTATTGGATGTTTTGCACATTATTATGTAGCTACAAAAAA
CATATTATTAGCTCTTGAAAAAGCAACAGCTTATGCAGCACTTAGTGTTACAAGATATGGTACTCAAACTTCTTATCCTA
CAAAGGAAGAATTTTTAAAATAA

Protein sequence :
MDIAVIGSNMVDLISYINRMPKEGETLEAPDFKMGCGGKGANQAVAAARLRSDVMMVSKVGDDLFGQNTIKNFKNNGVNT
GFVTVQKNQASGVAPIFVDRESRNSILIIKGANKNLSPTDIDDASEELKKCSLIILQLEIELETVYYAIDFANKNNIPVL
LNPAPAIKELDFNYVYKCDFFVPNETELEILTNKPVNTIEGIRKAAHLIGDKGVKNVIVTMGSKGLLWINKDEEHFIKAR
KVDAVDTTGAGDGFIGCFAHYYVATKNILLALEKATAYAALSVTRYGTQTSYPTKEEFLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoK ADD91722.1 deoxyribokinase DeoK Not tested PAI-I AL862 Protein 1e-81 66
unnamed CAE85173.1 hypothetical protein Not tested PAI V 536 Protein 2e-81 66
ORF4 AAK27331.1 unknown Not tested PAI-I AL862 Protein 1e-74 63