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Name : CLK_0497 (CLK_0497) Accession : YP_001786445.1 Strain : Clostridium botulinum Loch Maree Genome accession: NC_010520 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 1212825 - 1214627 bp Length : 1803 bp Strand : + Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664 DNA sequence : ATGGACAAGAAAAAGAAAGGCATTCCAAGACTATTGGAAATAGCTGGAGAAAAGCGAGGGCTACTTATTTGCTCATCCAT ATTTTCGGCTATCAGTGCAATTTTGATGTTATTACCGTATATAGCCGTTTATTTTATAATGGCAGAACTTTTAAAAAATG CTGCAAATCCTAGAAATGTTAATTCTACACAAATGCTATACTGGGGCACTGTTGCTCTTGTAGGATTGGTAGGAGGAATT GTTTTCATGTATATATCTGGGTTAATGTCTCATACAGCAGCATACAGGATATTATATAGTTTAAGGGTTCGTATGTCAGA GCATATTGGTAAATTACCTCTAGGCTATTTAAGTAATACATCAACGGGGATAGTAAAGAAAACCTTTGAACAAAACGTAG AAAAGATTGAAGCCTTTGTTGCTCATCAGTTGCCAGATATGGTAAATGTATTTGTGACAATGATTATTACAATAATTATT ATGCTAACTTTAAATCCATGGCTTACATTGGTTGCTATGATACCACTTGTTTTAGGCTTCTCAATACAAATGAAAAAAAG AAGTGGTAAGGCAGCAGAGGAGAGTGCAAAGAAATACTATAATGCCTTAGAGAGAATCAACTCATCAACTATTCAATATG TAAAAGGAGTTCCTGCTGTAAAGATATTTGGTAGAAGTGTATATTCTTTTCGTAAATTTTATGATGATATGATATCTTAC AGAGATTACTGTGTAAAGTATACAGATCAGTATCAAAATACCTATATAAGTTCAAAGGTACTATTAAATTCAACTTTAAC TTTTATATTGCCAGCAGGTATTCTTTTAATGGGAGGAAGATCAGGAGATCTTTCCTTTGCACAAACTCTTTTATTTTTTA TTATTTTAGCACCAGGAGTTGCGTCACCTATGTTGCGTTTTATGACTTTTGCATCTTCATTAGGAGATATTTCTGAGGGA GTTCAGCGTATTGATAAGATCTTTGCTGAGAAAACTATTTGTGAGGCAAAGAATCCTAGGATACCTTCCTCTTATGATAT TGAGTTTGATAATGTGTCCTTTTCTTATGAGTCTGAGGACACATCCACTAGGAAAGAAGCATTATCAAAAGTAAGTTTTA AGGCGAAAATAGGTTCATGTACAGCACTTGTAGGACCTTCAGGTTCTGGAAAATCTACAGTGGCTAATCTTATTCCACGT TTTTGGGATATTCAAAAAGGTCATATTAGAATCGGTGGAATAGATATTAAAGAAATTTCTACAGAGAATTTGATGGATTT AGTTTCCTTTGTTTTTCAAGATACATTTTTATTTCATGATACCTTATATGAAAATATCCGTGTAGGCAGACCAGATGCCA CAAAGGAAGAAATATTTAAGGCTGCAAAAGCTGCTCAGTGTCATGAGTTTATTATGGGACTTGAAAAAGGTTATGATACT ATTGTCGGTGAAGGAGGCACTCATCTTTCAGGGGGTGAGGAACAAAGAGTATGTGTTGCAAGAGCAATTTTAAAAAATTC TCCTATACTAGTTTTAGATGAAGCTACTGCTTTTTCAGATCCGGAAAATGAGTATCATATGCAGCTGGCTCTAAGGGAGC TTATGAAGAATAAAACTGTTATTATGATTGCACATAGGCTAACAACTATTAAAGATGCTGAAAATATAGTGGTTATGGAA GATGGAACTATTGTAGAGGCTGGCACTCATGATGTACTTATAAATAAAGATGGATTGTATAAAAAGCTTTGGAACTCATA TACAGTGGCCTCTAATTGGGGTATAAGTAAAGGAGGGATTTAG Protein sequence : MDKKKKGIPRLLEIAGEKRGLLICSSIFSAISAILMLLPYIAVYFIMAELLKNAANPRNVNSTQMLYWGTVALVGLVGGI VFMYISGLMSHTAAYRILYSLRVRMSEHIGKLPLGYLSNTSTGIVKKTFEQNVEKIEAFVAHQLPDMVNVFVTMIITIII MLTLNPWLTLVAMIPLVLGFSIQMKKRSGKAAEESAKKYYNALERINSSTIQYVKGVPAVKIFGRSVYSFRKFYDDMISY RDYCVKYTDQYQNTYISSKVLLNSTLTFILPAGILLMGGRSGDLSFAQTLLFFIILAPGVASPMLRFMTFASSLGDISEG VQRIDKIFAEKTICEAKNPRIPSSYDIEFDNVSFSYESEDTSTRKEALSKVSFKAKIGSCTALVGPSGSGKSTVANLIPR FWDIQKGHIRIGGIDIKEISTENLMDLVSFVFQDTFLFHDTLYENIRVGRPDATKEEIFKAAKAAQCHEFIMGLEKGYDT IVGEGGTHLSGGEEQRVCVARAILKNSPILVLDEATAFSDPENEYHMQLALRELMKNKTVIMIAHRLTTIKDAENIVVME DGTIVEAGTHDVLINKDGLYKKLWNSYTVASNWGISKGGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-112 | 43 |
