Gene Information

Name : CLK_3261 (CLK_3261)
Accession : YP_001785415.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Resistance
Product : macrolide efflux ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 110732 - 111427 bp
Length : 696 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
TTGTTAATAGTTAAAGATGTAGAAAAAACTTATAATACAGGAGAAATAAGTTTTAAAGCTTTAAAAGGAATATCTTTAAA
AATAGAAAGAGGAGAATTTACATCTATAATGGGTCCATCTGGTTCCGGTAAATCTACATTTATGAATATATTAGGATGTC
TAGATAAAATGGACAAGGGTGAATACATACTAAATGGTAAAGATGTAACGGATTTAACAGAAAACGATCTAGCTTATGTT
AGAAATAAAGAAATAGGATTTGTTTTTCAGGCATTTAATTTATTACCTAGAATGACAATATTAGATAACGTGGAATTACC
AATGGTTTATGCTGGAGTACCATTAAAAGAAAGAAAAGAGCGTGCATTAAATGCTTTAGAGAGAGTAGGACTTATAGAGA
GAATAAATCATAGACCTAATGAAATATCTGGTGGTCAAAAACAAAGAGTCGCTATAGCTAGAGCTATAGTAAACAATCCA
TCTGTTATAATGGCAGATGAACCTACAGGAAATTTAGATACAAAGTCATCATTAGATATAATGAGAATTTTTCAAAATCT
AAATGAAGAAGGCTCTACTATAATAATGGTAACTCATGAACCTGATATTGCTAAATATACTAAAAGAGTAGTTAAATTTA
GAGATGGCCATATAGTATCAGATGAAAAAGTTTTAAATAGGGAGATAGTAGAATGA

Protein sequence : 
MLIVKDVEKTYNTGEISFKALKGISLKIERGEFTSIMGPSGSGKSTFMNILGCLDKMDKGEYILNGKDVTDLTENDLAYV
RNKEIGFVFQAFNLLPRMTILDNVELPMVYAGVPLKERKERALNALERVGLIERINHRPNEISGGQKQRVAIARAIVNNP
SVIMADEPTGNLDTKSSLDIMRIFQNLNEEGSTIIMVTHEPDIAKYTKRVVKFRDGHIVSDEKVLNREIVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-33 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_3261 YP_001785415.1 macrolide efflux ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-59 55
CLK_3261 YP_001785415.1 macrolide efflux ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-46 47
CLK_3261 YP_001785415.1 macrolide efflux ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-36 42