Gene Information

Name : CLK_0411 (CLK_0411)
Accession : YP_001786359.1
Strain : Clostridium botulinum Loch Maree
Genome accession: NC_010520
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1121492 - 1122214 bp
Length : 723 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGGAGACAATATCTTTAAGTAATAAAAAAATATTAATAATTGATGATGAAGAAGATATAGTTAGATTAATAAGAACAGT
ACTTAAAAAAGAAGGATTTCAAAATATATATTATGCTACTAACTTAGAAGATGGATTTAAAGAGTTTAATAAGGTAGAGC
CAGATATTATAATTTTAGATATTATGTTACCAGATGGGGAAGGGTATGAATTATGTAAAACAATAAGAGCTAAATCTAAG
GTACCCATACTATTTTTATCTGCTAAGGGTGAAGAAATAGATAAAATATTAGGATTTGCTATAGGTGGAGATGATTATAT
AACTAAACCTTTTAGTACAAAGGAGTTAGCCTATAGGGTAAAGGCTCATTTAAGAAGGTATTCCTACGTGGAAAATGCTA
ACGAGGAAAAAAATATTTTATCCTTTGGACCCTTTGAGTTAAATATAAGTAAGGGAGAATTTAAAAAAGAAGGGAGTCTT
ATAGAATTAAAACCTAAAGAATTAGCATTAATAGCTTTTTTTGCAAAACATCCAAATCAAATAATAAGTAAAGAAAAAAT
TTGTGATAATGTTTGGGGAGAAGACTATTATGGATTTGATAATACTATAATGGTTCACATTAGAAGACTTAGAGAAAAAA
TTGAAAAGGAGCCATCAAGACCAGAGTATTTAATAAATGTTAAGGGACTAGGATACAAATTGGTGATAAAAAATGAAAAA
TAA

Protein sequence : 
METISLSNKKILIIDDEEDIVRLIRTVLKKEGFQNIYYATNLEDGFKEFNKVEPDIIILDIMLPDGEGYELCKTIRAKSK
VPILFLSAKGEEIDKILGFAIGGDDYITKPFSTKELAYRVKAHLRRYSYVENANEEKNILSFGPFELNISKGEFKKEGSL
IELKPKELALIAFFAKHPNQIISKEKICDNVWGEDYYGFDNTIMVHIRRLREKIEKEPSRPEYLINVKGLGYKLVIKNEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 6e-34 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLK_0411 YP_001786359.1 DNA-binding response regulator NC_012469.1.7685629. Protein 1e-30 45
CLK_0411 YP_001786359.1 DNA-binding response regulator FJ349556.1.orf0.gene Protein 2e-28 42
CLK_0411 YP_001786359.1 DNA-binding response regulator NC_012469.1.7686381. Protein 1e-28 41