|
Name : HSM_0936 (HSM_0936) Accession : YP_001784268.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 1067268 - 1068587 bp Length : 1320 bp Strand : + Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGTCTAATTATTTTGACAAAATTGCAAAGGTAAATTACGAAGGAGCAAATTCCACTAATCCTTTCGCTTTTAAACACTA CAATCCAAATGAAGTTATTTTAGGTAAAACAGTAGAGGAACACTTGCGTCTGGCAGTCTGCTATTGGCACACGTTCTGCT GGACAGGTAACGATATGTTCGGTGCCGGTTCATTGGATCGTAGTTGGCAAAAAACAGGTGATTTGCTGGTTGGTGCAAAA CAAAAAGCAGAAATTGCTTTTGAATTTTTCCAAAAATTAGGTGTGCCTTATTATAGTTTTCACGATGTAGATATTGCTCC TGAAAGCAATAATTTCAAAGAATATTTACATAACTTCAATACTATTGTGGATATTTTAGAGAAAAAACAATCAGAAACCG GTGTGAAGTTGTTATGGGGAACAGCAAACTGCTTTACTAATCCTCGTTATATGTCAGGGGCTTCTACCAACCCTAATCCG GAAGTATTTGCTTGGGCAGCAGCACAAGTTTTTACTGCAATGAATGCAACTCAACGCTTAGGGGGTGAAAACTATGTATT ATGGGGCGGACGAGAAGGGTATGAAACATTGCTGAATACCGATCTCAAACGTGAACGTGAACAAATTGGCCGTTTTATGC AATTAGTGGTAGAACATAAATATAAAATCGGCTTTCAAGGTACATTACTAATTGAACCGAAACCACAAGAGCCAACTAAA CATCAGTACGATTATGATGTTGCAACAGTTTATGGTTTTTTAAAACAATTCGGATTAGAAAATGAAATTAAAGTGAATAT TGAAGCTAACCATGCAACCTTGGCAGGGCATACATTCCAACATGAAATTGCAACGGCAACTTCATTAGGCATTTTCGGTT CTATTGATGCTAACCGTGGCGATCCGCAATTAGGCTGGGATACCGACCAATTCCCGAACAGCGTGGAAGAAAATACGTTG GCAATGTATGAAATCTTAAAAGCGGGTGGTTTCACCACAGGCGGTTTCAACTTTGATGCGAAAATTCGTCGCCAAAGTAC CGACCCGTATGATTTATTTCATGCCCATATCGGTGCAATGGATGTGTTAGCTTTGTCGCTCAAACGTGCTGCAAAAATGA TTGAAGACCAAACGTTGCAAAAAGTGGTCGATAACCGCTATGCTGGTTGGGATCAAGAGCTGGGTCAGAAAATTCTAAGT GGCAAAGCGAGCTTGGAGGATCTTGCTAAAATAGTAGAAACTCAAGGGTTAGATCCAAAACCTGTTTCAGGGCAGCAAGA ATATTTAGAAAATTTAGTGAATAGCTATCTTTATCGTTAA Protein sequence : MSNYFDKIAKVNYEGANSTNPFAFKHYNPNEVILGKTVEEHLRLAVCYWHTFCWTGNDMFGAGSLDRSWQKTGDLLVGAK QKAEIAFEFFQKLGVPYYSFHDVDIAPESNNFKEYLHNFNTIVDILEKKQSETGVKLLWGTANCFTNPRYMSGASTNPNP EVFAWAAAQVFTAMNATQRLGGENYVLWGGREGYETLLNTDLKREREQIGRFMQLVVEHKYKIGFQGTLLIEPKPQEPTK HQYDYDVATVYGFLKQFGLENEIKVNIEANHATLAGHTFQHEIATATSLGIFGSIDANRGDPQLGWDTDQFPNSVEENTL AMYEILKAGGFTTGGFNFDAKIRRQSTDPYDLFHAHIGAMDVLALSLKRAAKMIEDQTLQKVVDNRYAGWDQELGQKILS GKASLEDLAKIVETQGLDPKPVSGQQEYLENLVNSYLYR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 6e-105 | 51 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 4e-105 | 51 |
