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Name : HSM_0549 (HSM_0549) Accession : YP_001783891.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 626281 - 628362 bp Length : 2082 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGGGTGGACAATTCTTAGACGCTATTCCACTTACTTCTTTGTCGGGTGTCGGTGCCGCAATAGCAGAAAAATTAGGTAG AATTGGGCTTTTTAGCCTGCAAGATCTTCTGTTTCATTTGCCTATTCGTTATGAAGATCGTACCCGTATTACCCCTATTA TTGATCTTCGTATTGATCAACATGCGACAATTGAAGGAATAGTACAAACTTGTGATATTCAATTTGGTCGTCGTCCAGTT CTTGTGGTGACGCTTTCTGACGGTACTGCCAAAATTGCCTTACGCTTTTTTAATTTTAATGCAGGTATGAAAAATGGCTT TCAGCTTGGAGCGAGGGTGAAAGCCTTTGGGGAAATTAAGCGTGGTCGATTTATGGCTGAAATTCATCACCCTGAGTATG AAATTATTCGTGATAATAGACCTCTTCAGTTAGCAGAAACGCTCACCCCAATTTATGCGACAACGGAAGGTTTGAAGCAA AATACATTACGAAAGTTGACTGAGCAGGCATTAGCGTTGCTAGAAAAAATGCCATTAGCGGAATTATTGCCTAGAGCTTT TAATCCCCATGATTTTAGTTTAAAACAGGCCATTTACGTTTTACATCGCCCACCACCAGATATTTCTTTGGAATTGTTGG AGCAAGGAAAACACCCTGCACAGTTACGTTTAATTTTTGAAGAATTATTAGCACATAATCTTGCTATGCAAAAAGTGCGG TGCGGATCTCAACATTTTTCAGCTTTACCCTTACGTTATCAAACAGCATTGAAGCAAAATTTTCTTGATTTATTGCCATA TCAACCGACAAATGCACAACAAAGAGTTGTTGCTGAAATTGAATATGATCTGGGACGTTCTTTCCCAATGATGCGTTTGG TACAAGGCGATGTTGGCTCCGGTAAAACTTTAGTTGTTGCCTTAGCTGCATTAACTGCTATTGATAACGGTAAACAGGTA GCACTCATGGTGCCGACTGAAATTTTGGCAGAGCAACATACTGCAAATTTCCAACGTTGGTTTGAACCGTTAGGAATAAG AGTGGGTTGTTTGACAGGAAAAGTAAAAGGCAAATTTCGTCAAGCCACATTGGAGGAGATATCCCAAGGCAATATACAAA TGGTTGTTGGTACTCATGCCTTGTTTCAAGATGATGTCAAGTTTGCCGAACTGGTATTAGTTGTTATTGATGAACAACAT CGCTTTGGTGTACATCAACGCCTGATGTTGCGTGAAAAAGGAAAGTATGCCGGTATTTATCCACATCAATTAATTATGAC TGCAACACCTATTCCTCGTACATTGGCAATGGTAGCCTATGCAGATTTAGATACTTCAATTATTGATGAGTTACCTCCGG GAAGAACACCAATTCAAACTATTGCGGTATCTGAAGAACGCAGAACCGAAATCGTCGCTAGGGTGTATAATGCTTGTGTT AATGAAAAACGCCAAGCGTATTGGGTTTGTACTTTGATTGATGAAAGTGAAGTATTAGAAGCCCAAGCAGCAGAAAGTAT TGCAGAGGATCTACAAAAAGCCTTGCCGGTACTACGGATTGGTTTGATACATGGCAGAATGAAAGTGAGTGAAAAGCAAG AAGTAATGAGGCAATTTAAAAATGCTGAATTGAATTTGTTGGTCGCTACAACAGTAATTGAAGTCGGGGTTGATGTACCT AATGCGAGTTTAATGATTATTGAAAATGCGGAACGATTAGGTTTGGCACAATTACATCAATTGCGTGGTCGGGTTGGGCG TGGTAGTACGGCATCCTATTGTGTTTTAATGTATAAATCACCTTTGAGTAAAGTATCGAGAAAACGTTTAGAAGTAATGC GTTCAAGTCAAGATGGCTTTTTTATTTCTGAGCAAGATTTAGAAATTCGTGGACCGGGAGAAGTTTTAGGTACCAAACAG ACGGGTGTTGCAGAGTTTAAAGTGGCTGATTTAATACGAGATCGTAAAATGCTGCCTACTGTTCAACATTATGCCCGTCT ATTAATTACACGATCTCCAAAGTTAGCAGATGACCTCATTCAGCGTTGGCTTAAAAATAAAGAAATTTATACCAATGCGT AA Protein sequence : MGGQFLDAIPLTSLSGVGAAIAEKLGRIGLFSLQDLLFHLPIRYEDRTRITPIIDLRIDQHATIEGIVQTCDIQFGRRPV LVVTLSDGTAKIALRFFNFNAGMKNGFQLGARVKAFGEIKRGRFMAEIHHPEYEIIRDNRPLQLAETLTPIYATTEGLKQ NTLRKLTEQALALLEKMPLAELLPRAFNPHDFSLKQAIYVLHRPPPDISLELLEQGKHPAQLRLIFEELLAHNLAMQKVR CGSQHFSALPLRYQTALKQNFLDLLPYQPTNAQQRVVAEIEYDLGRSFPMMRLVQGDVGSGKTLVVALAALTAIDNGKQV ALMVPTEILAEQHTANFQRWFEPLGIRVGCLTGKVKGKFRQATLEEISQGNIQMVVGTHALFQDDVKFAELVLVVIDEQH RFGVHQRLMLREKGKYAGIYPHQLIMTATPIPRTLAMVAYADLDTSIIDELPPGRTPIQTIAVSEERRTEIVARVYNACV NEKRQAYWVCTLIDESEVLEAQAAESIAEDLQKALPVLRIGLIHGRMKVSEKQEVMRQFKNAELNLLVATTVIEVGVDVP NASLMIIENAERLGLAQLHQLRGRVGRGSTASYCVLMYKSPLSKVSRKRLEVMRSSQDGFFISEQDLEIRGPGEVLGTKQ TGVAEFKVADLIRDRKMLPTVQHYARLLITRSPKLADDLIQRWLKNKEIYTNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 7e-104 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HSM_0549 | YP_001783891.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 0.0 | 59 |
