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Name : HSM_0508 (HSM_0508) Accession : YP_001783852.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 585371 - 587674 bp Length : 2304 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: hso:HS_1493 transcription accessory protein, RNA-binding protein containing S1 domain DNA sequence : ATGTTAAATCAACAAATCGCCGGTATTATTGCGAAAGAATTAGCTGTTCTGCCAAGTCAAATTTTATCGGCTATCCAATT ATTAGATGATGGCAATACAATTCCTTTCATTGCTCGTTATCGTAAAGAAATGACCGGTGGATTAGATGATACCCAATTAC GTCATTTTGAAACACGTTTAATTTATTTACGTGAGTTAGAAGATCGTCGCCAAACGATTCTCAACTCTATTGAAGAACAA GGGAAATTGACAGATGAATTGCGTAGTCAAATTGAACAAACGCAAAGTAAAACTGAATTAGAAGATCTTTATTTACCGTA TAAACCGAAACGTCGCACAAAAGGGCAAATCGCAATTGAGGCAGGAATTGAACCTTTAGCTGATTTGCTTTGGAATGCAC CTGAGAATGAACCAGAAATCGTTGCGGCAGATTATATCAATGCGGAACAAGGGTTTGCGGATATAAAATCTGTGCTTGAT GGTGCTCGTTATATTTTAATGGAGCGTTTTGCCGAAGATGCACAATTGTTAGCGAAAATCCGCCAATATTTACAGAAAAG TGCGGTACTGGTTTCCAATGTTTTAGAAGGCAAAGAGGCTGAGGGAGAAAAGTTCCGAGATTATTTTGAACATCAGGAAT TACTCCGCAATGTTCCTTCTCATCGTGCTTTAGCTATGTTCCGAGGGCGTAATGAAGGCTTTTTGCAATTAAGGTTGAAT GCGGATCCTGAGCAAGAAGAAGGTGTTCGTCATAGTTATTGTGAAGAAATTATTCGAGAGCATTTGGGTATTCATTTAAC TCAGCAACCAGCGGATAAGTGGCGTGAGCAGGTTATCTCGTGGACTTGGCGGATTAAAATCTCTTTACATCTTGAAACTG AACTGATGAGCAGTTTACGTGAGAAAGCTGAAGATGAGGCAATTGATGTTTTTGCCCAAAATCTAACTTCATTATTAATG GCAGCACCTGCCGGAGCGAAAAATACTATGGGGCTAGATCCCGGTTTAAGGACAGGTGTAAAAGTCGCTATTGTTGATAA TACGGGAAAACTAGTGGCAACAGAGACGGTTTATCCACATACCGGACAAATGAATACGGCAATGTCAGTTATTTATCAAT TAATTAAGCAACATAATGTTGAGTTAATTGCCATTGGTAACGGCACAGCTTCAAGAGAAACTGAACGATTTGCTAAAGAT GTTATTAATAAAATTGAGCAAAATAAACCACAAACAGTTGTGGTCAGTGAAGCAGGTGCATCTGTTTATTCCGCATCAGA ATTAGCGGCACAAGAGTTTCCTGAACTGGATGTGTCTTTGCGAGGTGCAGTTTCTATTGCTCGCCGTTTACAAGATCCAC TGGCGGAGTTAGTGAAAATTGAACCGAAAGCAATTGGCGTTGGGCAATATCAACATGATGTAAACCAAACTCAGCTTGCT CGTAAGCTAGATGCGGTAGTAGAAGATTGTGTAAATGCCGTTGGGGTTGATTTAAATACGGCATCAGCACCTTTACTTGC TAGAGTTGCGGGTATGACTAAACATCTTGCACAAAATATTGTGGCATATCGTAATGAAAACGGGCGTTTTGAAAGCCGTA ATCAGTTAAAAAAAGTACCGCGTTTGGGTCCCAAAGCCTTTGAACAATGTGCCGGTTTTATGCGTATTGCACAAGGTAAA AATCCGCTTGATGCCTCCGGTGTTCACCCTGAGGCTTATCCTGTTGTTGAAAAGATTTTACAGGCTACGGAAAAATCTAT TCAAGATTTAATGGGAAATGTGAGTGCTGTTCGACAATTAGATGCAAAACAATTTACTGATGAGCAATTTGGAATGCCAA CAGTTTTAGACATTTTCAAAGAGTTGGAAAAACCCGGAAGGGATCCTCGAGGTCAATTTAAAACGGCAGTATTTATGGAC GGTGTTGAAGAAATCACTGACTTAAAAGCAGGTATGATTTTAGAAGGATCTGTAACTAACGTAACGAATTTTGGGGCATT TGTTGATATCGGTGTGCATCAAGACGGTTTAGTTCATATTTCATCTCTTTCCGACAAATTTGTGGAGAACTCTCATGAAG TTGTGAAAACAGGCGATATTGTGAAAGTCAAAGTGTTGGAAGTTGATGTTGCCCGTAAGCGTATTGGACTAACCATGCGT TTAGATGAAAATCCGTCCAAAACCGACCGCACTTCAGTTAAAACGACCTCAGTCCATGTAAAAGAAGTGAATAAAAATCG GAAAAGTAGCAATAATGTTATGGGAAATGCGTTTGCCGATGCGTTAAAAAATTGGAAAAAATAG Protein sequence : MLNQQIAGIIAKELAVLPSQILSAIQLLDDGNTIPFIARYRKEMTGGLDDTQLRHFETRLIYLRELEDRRQTILNSIEEQ GKLTDELRSQIEQTQSKTELEDLYLPYKPKRRTKGQIAIEAGIEPLADLLWNAPENEPEIVAADYINAEQGFADIKSVLD GARYILMERFAEDAQLLAKIRQYLQKSAVLVSNVLEGKEAEGEKFRDYFEHQELLRNVPSHRALAMFRGRNEGFLQLRLN ADPEQEEGVRHSYCEEIIREHLGIHLTQQPADKWREQVISWTWRIKISLHLETELMSSLREKAEDEAIDVFAQNLTSLLM AAPAGAKNTMGLDPGLRTGVKVAIVDNTGKLVATETVYPHTGQMNTAMSVIYQLIKQHNVELIAIGNGTASRETERFAKD VINKIEQNKPQTVVVSEAGASVYSASELAAQEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQTQLA RKLDAVVEDCVNAVGVDLNTASAPLLARVAGMTKHLAQNIVAYRNENGRFESRNQLKKVPRLGPKAFEQCAGFMRIAQGK NPLDASGVHPEAYPVVEKILQATEKSIQDLMGNVSAVRQLDAKQFTDEQFGMPTVLDIFKELEKPGRDPRGQFKTAVFMD GVEEITDLKAGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVENSHEVVKTGDIVKVKVLEVDVARKRIGLTMR LDENPSKTDRTSVKTTSVHVKEVNKNRKSSNNVMGNAFADALKNWKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 60 |
