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Name : xerD (HSM_0335) Accession : YP_001783684.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 358499 - 359392 bp Length : 894 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGAAAGACAACGCATTAATTGATCTTTTTTTAAATGAACTTTGGTTAGAAAAAGGATTATCCGAGAATACCGTGCAATC TTATCGCTTGGATCTGACCGCACTTTCGCAATGGCTGGAGCCTCAGGGGTTGAGTTTAGAAACCCTTGATGTGGTAGATT TACAAACATTCTTAGGCGAGCGTTTGACACAAGGTTATAAAGCAACAAGTACTGCTAGAATGTTAAGTGCATTACGCAAA CTTTTTCAATATTTGTATCGAGAAAAATACCGTTCGGATGATCCAAGTGCGGTGTTAAGTTCACCTAAATTACCGAGCCG TTTGCCTAAATATCTGACGGAACAACAAGTAACGGACTTACTCAACACACCCAATACAGAAATTCCGTTGGAATTAAGAG ATAAGGCAATGTTGGAAATGTTGTATGCAACCGGATTACGTGTAACGGAATTGGTGAGTTTAAGTCTTGATAGTATCAAT ATCAATCAGGGTGTTGTGCGAGTTATCGGGAAAGGGAAGAAAGAACGTATTGTGCCGATGGGAGAGGAAGCAAACTATTG GCTTCGTCAATTTATCCTATATGGCAGATCCTTTCTCTTGGCAGGGCAGAGTTCCGATGTTGTTTTTCCAAGCCGTCGGG GAACTCAAATGACACGCCAAACGTTTTGGCATAGGGTAAAATATTATGCAATATTGGCTGAAATTGATACTTCTGCACTT TCTCCCCACGTCTTACGTCATGCTTTTGCTACGCATTTAGTTAATCATGGTGCCGATTTGCGTGTGGTACAAATGTTACT GGGACATAGCGATTTGTCCACTACACAAATTTATACACATGTGGCTAAAGAGCGGTTAAAAATTTTACATGAAAGATTTC ATCCAAGAGGATAA Protein sequence : MKDNALIDLFLNELWLEKGLSENTVQSYRLDLTALSQWLEPQGLSLETLDVVDLQTFLGERLTQGYKATSTARMLSALRK LFQYLYREKYRSDDPSAVLSSPKLPSRLPKYLTEQQVTDLLNTPNTEIPLELRDKAMLEMLYATGLRVTELVSLSLDSIN INQGVVRVIGKGKKERIVPMGEEANYWLRQFILYGRSFLLAGQSSDVVFPSRRGTQMTRQTFWHRVKYYAILAEIDTSAL SPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQIYTHVAKERLKILHERFHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 2e-53 | 54 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 2e-53 | 54 |
