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Name : HSM_0267 (HSM_0267) Accession : YP_001783618.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Unknown Product : polypeptide-transport-associated domain-containing protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2831 EC number : - Position : 279733 - 281478 bp Length : 1746 bp Strand : + Note : PFAM: Hemolysin activator HlyB domain protein; polypeptide-transport-associated domain protein ShlB-type; KEGG: msu:MS1169 FhaC protein DNA sequence : ATGAAAAAAATGTCGGTATTAATTTGGCTTTGCGGTTTTTCATCATTATTGTCGGCGGTAGAACGACCGCTCCTCCAATT AAATCGTATTGATGCCCAACAGCAACAACGCCAAAAGGAACAAATTCAACAGCAAAGTGAACGACTTCGTTCCGATCCCG ATGTGAGAATGGAAATTTCTTCAGAAAAACCTACCGCACTTCCCTTTAATGAATCTCCTTGCTATCCCATTCAACATCTT TCCATTGTAGATTACTCCTCCGATAACAAGACAAAACCTAGCCAATTTCAATGGGCACTGAATAAAGCTGTTACGCAATT AAACCTCCAATTACCGCATTGTTTCGGAACTCAAGGACTAGGGATTTTGATGAAACAGGTGCAAAATAATGTGATTGAAC GAGGCTATATCACAACCAGAGTGGTTGCCGGCGAACAAAATTTAACGCAAGGCGTATTTTCTTTAACGGTTATTCCCGGT CAAGTTCGCCATACGATTATTGCCGATGTAAGTAGTCTCCCTTGGTTTAGTAAACTGACAGCTAAAACCGCATTGGCATT TAAACAGGGAGATTTAGTTAATATCCGTGATATTGAACAATCCTTGGAAAATCTCAAACGTGTGCCAACTGCAGATGCCA ATATCGACATTCTTCCGGCTGATAACAGTTCAGCATTCGGTGAAAGCGATATTAAAATCACCTATCAGCAGCGGTTTCCA TTCCGATTTAGCTTAAATTTAGATGATTCGGGTTCAACATCTACGGGGAAATGGCAAGGCTCTGCCACCCTTTCGTGGGA TAATCTTTTTTCTGCCAATGATTTATTCTATACCACTTTCACACATAGCTTAAAACGTCACAGCGATAATTCGGGGCGTC GAGCAACGAGAAACTATGGCTTCTATTATTCTGTTCCTTTGGGTTATTGGGCACTCTCCGCCTCATTGTATAAAACAGAT TATCATCAAGATGTCTTTGGGGCGTTTGATAATACTTACCTCTATGCAGGGCGTAGTGAGACAACCAATTTGAATCTTGC CTATCGTCTTTATCGAGATGCGGTACGTAAAACCACAATTTCAGGTGGCTTTTGGTCTCGCCACTCGAAAAACTACATTG ATGATGCTGAAATTGATGTTCAACGTCGCCGAATGGCTGGTTGGCAACTCAACCTTAGCCATATTGAATATATTAAGGCA GTAACACTGAAGCTTTCTCTAGGATTTAAATGGGGAACAGGTGTAGGTCGCACCATAGCGGCACCGGAAGAATATTGGGG AAACGGTACTTCTCGTCCTAAAATTATTACCGCCTCGGTAGACATTAATTATCCTTTCTATATGGGGAAGCAACCCTTGG CATTTAATACGACTTGGTCCACTCAATGGAATAAAACTCCTCTTATTCAACAAGATAGATTGAGCATTGGTGGGCGTTAT ACGGTGCGTGGATTTGACGGTGAGCTTACCTTATCGGGCGAGCGAGGTTGGCTATGGCGTAATGAACTCAGTTGGAATAT TGCAAATAAAGGACATTGGGTTTACTTAGCCTTAGATGGCGGTAGAGTGATGGGACGTAGTGATGGAATACGATTAGGGC ATCATTTAATGGGGACAGTTTTAGGTCTGCGTGGTAGTTGGACGCATTTTTATTATGATGTATTTATTGGACGGCCATTA AGCAAGCCGAGCGGTTTTAGAACATCGCATACCGTAACCGGCTTTAATATCGGCTTAACCTTTTAA Protein sequence : MKKMSVLIWLCGFSSLLSAVERPLLQLNRIDAQQQQRQKEQIQQQSERLRSDPDVRMEISSEKPTALPFNESPCYPIQHL SIVDYSSDNKTKPSQFQWALNKAVTQLNLQLPHCFGTQGLGILMKQVQNNVIERGYITTRVVAGEQNLTQGVFSLTVIPG QVRHTIIADVSSLPWFSKLTAKTALAFKQGDLVNIRDIEQSLENLKRVPTADANIDILPADNSSAFGESDIKITYQQRFP FRFSLNLDDSGSTSTGKWQGSATLSWDNLFSANDLFYTTFTHSLKRHSDNSGRRATRNYGFYYSVPLGYWALSASLYKTD YHQDVFGAFDNTYLYAGRSETTNLNLAYRLYRDAVRKTTISGGFWSRHSKNYIDDAEIDVQRRRMAGWQLNLSHIEYIKA VTLKLSLGFKWGTGVGRTIAAPEEYWGNGTSRPKIITASVDINYPFYMGKQPLAFNTTWSTQWNKTPLIQQDRLSIGGRY TVRGFDGELTLSGERGWLWRNELSWNIANKGHWVYLALDGGRVMGRSDGIRLGHHLMGTVLGLRGSWTHFYYDVFIGRPL SKPSGFRTSHTVTGFNIGLTF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB1762 | NP_274762.1 | hemolysin activation protein HecB | Not tested | IHT-C | Protein | 4e-85 | 41 |
