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Name : HSM_0197 (HSM_0197) Accession : YP_001783548.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 206856 - 207746 bp Length : 891 bp Strand : - Note : PFAM: transporter permease; ABC-3 protein; KEGG: hso:HS_0326 chelated iron ABC transporter permease DNA sequence : ATGTTAGAGCTATTACTTGAGCCGTTTTCTTATGATTTTATGTTTAAGGCGATTGTGGTCAGTGGTGCCATTGGAGCGGT TTGTGCTTTTCTTTCCGCTTATTTAATGCTGAAAGGTTGGTCACTGATCGGTGATGCGTTATCCCACGCCGTTGTCCCAG GCGTTGCTATTGCCTATGCCTTGGCATTACCTTATGCCGTCGGGGCTTTTTTCTCTGGGCTACTTGCCACTATTGCCATT TTAGCAGTGAAATACGTGACTAAACTCAAAGAGGATGCAGTAATCGGTTTTATTTTCACCTCTTTCTTCGCTCTCGGATT GTTGATTATTTCAATTAATCCCACTTCCGTGAACGTACAATCTATCGTTTTGGGCAATATTTTAGGTATTGCCGATGAAG ATATGATCCAAGTCGCTATTATTCTCGGTATATCATTTGTATTGTTGCTACTCTTTTGGAAAGACCTAATGCTTGTGTTC TTTGATGAAATTCAAGCCAAAGCGGTAGGGCTATCGCCTTTAAAATTCAAAATTTTATTCTTTACCTTGTTAAGTGCATG CATTGTAACCGCCTTACAAGGAGTAGGGGCTATTTTGGTAATTGCGATGGTGATTACACCTGGAGCAACAGCATATTTGC TCACCGATCGCTTCGATCGCCTGTTGATTATTTCGATTTTACTCGGTGGTACTACTAGCTCACTAGGAGCATATTTGAGT TATTTCGCAGACAGTGCAACTGGTGGCTTTATTGTATCATTGCAAACGTTCATCTTCTTACTTGCTTTCTTTTTTGCTCC CAAATATGGTCTTATTCCACGTAAGCGAAGTACACAAAAAGCAGTGACTTCCTCACCAAATCTTGCAAATCAGGAGAAGC CAAATGTTTAA Protein sequence : MLELLLEPFSYDFMFKAIVVSGAIGAVCAFLSAYLMLKGWSLIGDALSHAVVPGVAIAYALALPYAVGAFFSGLLATIAI LAVKYVTKLKEDAVIGFIFTSFFALGLLIISINPTSVNVQSIVLGNILGIADEDMIQVAIILGISFVLLLLFWKDLMLVF FDEIQAKAVGLSPLKFKILFFTLLSACIVTALQGVGAILVIAMVITPGATAYLLTDRFDRLLIISILLGGTTSSLGAYLS YFADSATGGFIVSLQTFIFLLAFFFAPKYGLIPRKRSTQKAVTSSPNLANQEKPNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 5e-72 | 59 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 6e-72 | 59 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 6e-72 | 59 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 5e-72 | 59 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 5e-72 | 59 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 2e-41 | 42 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 1e-41 | 42 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-41 | 41 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-41 | 41 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-41 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HSM_0197 | YP_001783548.1 | ABC transporter | BAC0441 | Protein | 2e-87 | 68 |
| HSM_0197 | YP_001783548.1 | ABC transporter | BAC0351 | Protein | 3e-72 | 59 |
| HSM_0197 | YP_001783548.1 | ABC transporter | BAC0352 | Protein | 8e-42 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HSM_0197 | YP_001783548.1 | ABC transporter | VFG0527 | Protein | 3e-72 | 59 |
| HSM_0197 | YP_001783548.1 | ABC transporter | VFG0528 | Protein | 7e-42 | 42 |
