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Name : HSM_0196 (HSM_0196) Accession : YP_001783547.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 206021 - 206863 bp Length : 843 bp Strand : - Note : PFAM: ABC transporter; KEGG: hso:HS_0325 chelated iron ABC transporter permease DNA sequence : ATGTTTAATACGATTGTAGCGTGGTTTACCGAGCCCTTGGTGTATCCATTTATGCAACAAGCTATTATCATCGCACCTAT CATTGGGGCAGTATGTGCGATTTTATCGTGTTATTTAGTACTTAAAGGCTGGTCACTAATGGGTGATGCCATTTCTCACG CTGTATTGCCGGGAATTATTCTTGCCTATGTATTAGCAATTCCGATTGCGATTGGGGCATTTTGGGCAGGCATCTTTTGT GCAGTTTCCGTAGGTTATTTGAGAGATAACAGCCGAATCAAAGAAGACACAGTGATGGGAATTGTTTTTTCAGGAATGTT TGCTTTCGGTTTGGTGCTGTTTTCCAAAGTGGAAACCGATCAACATCTAATGCACATTCTGTTCGGAAATATTCTAGGCA TCATTAAGCAAGAATTTTGGCAAAGTATTGGCATTGCATTACTGGCATTTATCCTGATTGCCTTAAAACGCAAAGACTTG TTGCTTTACTGTTTTGATCCAAGTCACACACGAGTTGCAGGACTTAACACCAAATTTTTACACTATGGTTTACTGGTAAT CCTAGCGTTAGTCATCATCAGTGCAATGCAAGTTGTTGGCGTTATTTTAGTGGTGGCAATGCTCATTACACCTGGGATAA CAGGCTATATTTTAGCTAAACGCTTTGATTATATGATGCTAATTGCCGTTTGCACAGCAGTATTCAGTGGTATTTTTGGC GTATTGCTCAGTTTTCATTTCAACGTCGCCACAGGACCTTGTATTATCTTACTTCAAGCAAGCCTTTTTTTATGTGCCTT AGGTTATAGTAAATATATCGCGATGCGTGTAGTTAATATTTAG Protein sequence : MFNTIVAWFTEPLVYPFMQQAIIIAPIIGAVCAILSCYLVLKGWSLMGDAISHAVLPGIILAYVLAIPIAIGAFWAGIFC AVSVGYLRDNSRIKEDTVMGIVFSGMFAFGLVLFSKVETDQHLMHILFGNILGIIKQEFWQSIGIALLAFILIALKRKDL LLYCFDPSHTRVAGLNTKFLHYGLLVILALVIISAMQVVGVILVVAMLITPGITGYILAKRFDYMMLIAVCTAVFSGIFG VLLSFHFNVATGPCIILLQASLFLCALGYSKYIAMRVVNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 3e-51 | 51 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 3e-51 | 51 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 6e-51 | 50 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 6e-51 | 50 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 6e-51 | 50 |
| EF0576 | NP_814341.1 | cation ABC transporter permease | Not tested | Not named | Protein | 2e-36 | 42 |
| ef0094 | AAM75297.1 | EF0094 | Not tested | Not named | Protein | 1e-36 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HSM_0196 | YP_001783547.1 | ABC transporter | BAC0442 | Protein | 5e-68 | 62 |
| HSM_0196 | YP_001783547.1 | ABC transporter | BAC0352 | Protein | 2e-51 | 51 |
| HSM_0196 | YP_001783547.1 | ABC transporter | BAC0441 | Protein | 1e-31 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HSM_0196 | YP_001783547.1 | ABC transporter | VFG0528 | Protein | 1e-51 | 51 |
