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Name : HSM_1896 (HSM_1896) Accession : YP_001785210.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 2150274 - 2152853 bp Length : 2580 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGAAAGCCATGCACACATTCGAAAATCACACGCCAATGATGAAACAATATTTAAAAATAAAAGCGGAAAATCCGGATGT TTTGTTGTTTTATCGCATGGGTGATTTTTATGAGCTTTTTTATGATGATGCAAAAAAAGCTGCTGAATTATTAGATATTT CCCTAACTAAAAGAGGGCAATCAGCTGGACAACCGGTTCCAATGGCTGGCGTACCTTATCATGCAATAGAAGGATATTTA GCAAAATTGGTACAACTTGGGGAAAGTGTAGCAATTTGTGAGCAAGTTGGTGAGCCTGTTATAGCTAAAGGTCCGGTTGA ACGCCAAGTTGTACGTATTGTTACACCGGGAACAGTGAGTGATGAAGCATTGTTACCGGAAAAGCAAGACAATCTTATCG CTACGATTTATCAAGAAAAAACACAATTTGGCTTAGCTGTTTTAGATATGACTTCAGGGTGTTTTCAAATTAGCGAACTA CAAGATGCCGCCAGTTTACAAGCGGAGTTACAACGTATTCAACCGGTTGAATTACTATATTCGGAAGCGTTAGAGGATAA ACATTTAATTGAACAATTCAAAGGATTACGTCGTCGTCCTCTTTGGGAGTTTGAATTAAGTACGGCAATTCAATTACTTA ATCGCCAATTCGGTACAAAAGATTTGCGTGGTTTTGGTGTAGAAAAAGCGGTTTTAGGATTATGTGCTGCGGGTTGTTTG TTGCAATATGCAAAAGAAACGCAACGTACCGCACTTCCTCATATTCAAAGTATTAGCTTGTTACAAAATAGCGATACTGT ACAAATTGATGCGTCAACACGTAGAAATTTAGAACTAACCCAAAATCTTGCTGGCGGAACTGAAAATACACTTGCTGCAA TTTTAGATAAATGTGTTACCCCGATGGGAAGTCGCTTACTTAAACGTTGGATTCACCAGCCTATTCGCAATATTGAAAAA TTGCAGTATCGTCAACAACATATTCAAATGCTGTTGCAGCAAAATTTAGTTGAAGAATTACAACCTCTTTTACGTCAAGT TGGCGATATGGAGCGTATTCTTGCTCGGGTTGCCCTGCGTTCCGCTCGACCTCGAGATTTAACTCGGCTACGAACAGCGT TGGAACAAATACCTTTTATTCAACACCAATTAACAAAAATACCGCACTTTGTTGCATTTTCACAACAAATTGCTGATTTT TCTGTGCAATTAGCACTTTTGCAGCGAGCAATTATTGATAATCCCCCCTTACTTATTCGTGATGGCGGTGTCATTGCTGA AGGTTACAACGAGGAGCTTGATGAATGGCGGAGTTTGTCTGAAGGAGCAACACGCTACTTAAAGGATTTGGAGCAACGTG AGCGTGCAAATACTGGTATTGATACATTAAAAATCGGTTTTAATGCGGTGCATGGTTATTATATTCAAATCAGTCAAGGG CAAGCACATAAAGCACCGCTTCATTATGTACGTCGCCAAACATTGAAAAATGTAGAACGTTATATTATTCCTGAGCTAAA AACTTATGAAGAAAAAGTTCTAAAAGCAAAAGGAGCGTCACTTGCGTTAGAAAAACAACTTTATGATGAAATTTTCGATC AATTATTACCGCACTTAGGTGATTTACAACTAGCCAGTTTAACTTTGGCAGAACTTGATGTTTTAACCAATTTAGCGGAA CGGGCAGAAACCTTAAATTATGTTCAACCGCAATTTAGTACACAAGTCGGTTTGCAAATAATGCAAGGGCGTCATCCGGT TGTGGAGCAAGTGTTAAAAGAACCTTTTATTGCTAACCCTGTAGAACTTAATCAAAAGCGTCATTTGTTGATTATTACAG GACCGAATATGGGGGGTAAAAGTACTTATATGCGACAAACAGCATTGATTACTTTAATGGCATATATTGGTAGTTTTGTA CCTGCAGAAAGTGCGGTAATCGGACCTATTGATCGAATTTTTACACGTATTGGTGCTTCTGACGATCTTGCCTCCGGACG TTCAACGTTTATGGTCGAAATGACTGAAATGGCAAATATTTTGCACCAAGCCACAGAGCAAAGTTTAGTGCTTATTGATG AAATTGGGCGAGGAACTTCAACCTATGATGGACTTTCTCTTGCTTGGGCTTGTGCTGAACAATTGGCTCAAAAAATCCGC AGTTTAACGTTATTTGCCACGCATTATTTTGAGCTGACGGGATTACCAGAAAAAATCGAAGGTATCCATAATGTTCATCT TGATGCTTTTGAGCATAACGACAGTATTGCCTTTATGCACTCGGTACAGGAAGGTGCGGCAAGTAAAAGCTATGGTTTGG CTGTTGCTGCTTTAGCCGGTGTCCCACAAAATGTAATTAAATCGGCAAAACAGAAATTAAAACAGCTTGAAACACTTTCT CAGCAAAACAGTTACCAATCACAGTCCGTTTTGACACAAGTTCAAGGGGAATTAACTTTAATGGAAGAGGAGGAGAATAC AAGTGCGGTGATTGAAACGCTAAAAACGCTTGATCCTAATGAGTTAAGTCCGAAGCAAGCACTTGAGTGTTTATATCAGT TAAAGAAAATGTTGAATTAA Protein sequence : MKAMHTFENHTPMMKQYLKIKAENPDVLLFYRMGDFYELFYDDAKKAAELLDISLTKRGQSAGQPVPMAGVPYHAIEGYL AKLVQLGESVAICEQVGEPVIAKGPVERQVVRIVTPGTVSDEALLPEKQDNLIATIYQEKTQFGLAVLDMTSGCFQISEL QDAASLQAELQRIQPVELLYSEALEDKHLIEQFKGLRRRPLWEFELSTAIQLLNRQFGTKDLRGFGVEKAVLGLCAAGCL LQYAKETQRTALPHIQSISLLQNSDTVQIDASTRRNLELTQNLAGGTENTLAAILDKCVTPMGSRLLKRWIHQPIRNIEK LQYRQQHIQMLLQQNLVEELQPLLRQVGDMERILARVALRSARPRDLTRLRTALEQIPFIQHQLTKIPHFVAFSQQIADF SVQLALLQRAIIDNPPLLIRDGGVIAEGYNEELDEWRSLSEGATRYLKDLEQRERANTGIDTLKIGFNAVHGYYIQISQG QAHKAPLHYVRRQTLKNVERYIIPELKTYEEKVLKAKGASLALEKQLYDEIFDQLLPHLGDLQLASLTLAELDVLTNLAE RAETLNYVQPQFSTQVGLQIMQGRHPVVEQVLKEPFIANPVELNQKRHLLIITGPNMGGKSTYMRQTALITLMAYIGSFV PAESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLVLIDEIGRGTSTYDGLSLAWACAEQLAQKIR SLTLFATHYFELTGLPEKIEGIHNVHLDAFEHNDSIAFMHSVQEGAASKSYGLAVAALAGVPQNVIKSAKQKLKQLETLS QQNSYQSQSVLTQVQGELTLMEEEENTSAVIETLKTLDPNELSPKQALECLYQLKKMLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HSM_1896 | YP_001785210.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 69 |
