Gene Information

Name : HSM_1745 (HSM_1745)
Accession : YP_001785065.1
Strain : Haemophilus somnus 2336
Genome accession: NC_010519
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1986316 - 1986768 bp
Length : 453 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: hso:HS_1729 single-stranded DNA binding protein

DNA sequence :
ATGGCAGGAATCAATAAAGTGATTATTGTCGGTAATCTTGGCAACGATCCTGAAATGCGGACTATGCCTAATGGTGAAGC
AGTTGCTAATATTAGTGTGGCAACTTCTGAAAGTTGGACGGATAAAAATACCGGAGAACGTCGAGAAGTCACTGAATGGC
ATCGTATCGTTTTTTATCGCCGTTATGCTGAAATTTGTGGTCAGTACCTACGTAAAGGCTCTAAAATTTATATCGAAGGA
AAATTACGGACACGTAAGTGGCAAGACCAAAACGGGCAAGAGCGTTATACAACCGAAATCCAAGGTGAACTATTACAAAT
GTTAGATAGCCGTAATGCTACAAATAGCGTAGATGGACAACAATCTAACTATCAAGCTATGAGCCAATCTCCAAAAGCAA
CACATCCACAAGATTTACCAATGGATAACTTTGATGATGATATTCCGTTCTGA

Protein sequence :
MAGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERREVTEWHRIVFYRRYAEICGQYLRKGSKIYIEG
KLRTRKWQDQNGQERYTTEIQGELLQMLDSRNATNSVDGQQSNYQAMSQSPKATHPQDLPMDNFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 7e-67 100
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 2e-35 55
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 2e-35 55
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-35 55
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 2e-25 46