Gene Information

Name : HSM_1708 (HSM_1708)
Accession : YP_001785028.1
Strain : Haemophilus somnus 2336
Genome accession: NC_010519
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1953915 - 1954610 bp
Length : 696 bp
Strand : -
Note : KEGG: hit:NTHI0126 conserved membrane protein

DNA sequence : 
ATGAGTGAAGAAACTAAAGCTCGCCGAAAATCAGGTTTAATCAACCTGATTTTTGGAAAAATAAATATGTCGCTTGCTGC
AATTGCAGTATCTCTCATATTCAGCATTATTTTAGAGTGGATAGGCATTGCTTTCTGGTGGCCGCAAGAAGGGCATTTGC
ATAGCCAAACGATGATGCTCAATGAGATGCAATGGCTATCGGATGACTTTTCTCAAAGCCTGTTTGCCAAGTCTTCTACT
GCTTTTGCAACATCAATTATTGAAAACGTGTATAACTGGTTATTCGTTTATACGGGTGTTAAGGAGTGGTTAACTTCACC
GGGTAATGGTAGTATGGAACAGTGGGTACATCACTACGGCAGAGCCTATATTGAATCTGTTATTTATGTGGTGATCACCT
TTATTATTCGCCTCATTATTATTGTTTTTACCAGCCCACTCTTTTTATTGACTGCACTTTCCGGTTTAACCGAAGGACTG
TCATTACGAGATATACGAAAATTTGGTGCCGGGCGGGAATCAGCCTACCTATACCATCACGCTAGACGTTATATTATGCC
AATGATGGTCACAGCTTGGGTGCTTTATTTATCTATCCCGTTTTCAATTCATCCGAACATCATTTTAGTCCCAGCAGCCT
GTTTGTTTGGTTTATCCATCTGTATAACTGCGGCGAGTTTCAAGAAATTCTTGTAA

Protein sequence : 
MSEETKARRKSGLINLIFGKINMSLAAIAVSLIFSIILEWIGIAFWWPQEGHLHSQTMMLNEMQWLSDDFSQSLFAKSST
AFATSIIENVYNWLFVYTGVKEWLTSPGNGSMEQWVHHYGRAYIESVIYVVITFIIRLIIIVFTSPLFLLTALSGLTEGL
SLRDIRKFGAGRESAYLYHHARRYIMPMMVTAWVLYLSIPFSIHPNIILVPAACLFGLSICITAASFKKFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03170 YP_005176216.1 integrating conjugative element membrane protein, PFL family Not tested ICEPmu1 Protein 7e-96 100
PMI2587 YP_002152306.1 hypothetical protein Not tested Not named Protein 3e-28 42
RL035 AAP84162.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-32 41
unnamed ABR13374.1 hypothetical protein Not tested PAGI-5 Protein 2e-33 41
EXA46 ABD94655.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-33 41
RL046 AAP84172.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-33 41