Gene Information

Name : rplS (HSM_0168)
Accession : YP_001783521.1
Strain : Haemophilus somnus 2336
Genome accession: NC_010519
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 179653 - 180003 bp
Length : 351 bp
Strand : +
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
ATGAGTAATATCATTAAACAAATTGAACAAGAACAATTAAAACAAAACGTACCTAGCTTCCGTCCAGGGGATACTTTAGA
AGTTAAAGTATGGGTAGTGGAAGGAAGTAAACGTCGTTTACAAGCATTCGAAGGTGTGGTTATTGCAATTCGTCACCGTG
GGTTACATAGTGCTTTCACTTTACGTAAAATATCTAACGGCGTAGGTGTTGAGCGTGTATTCCAAACACATTCACCAATT
ATCGACAGTATTACTGTTAAACGTAAAGGTGCGGTACGTAAAGCCAAACTTTACTATTTACGTGAGCGTTCAGGTAAGTC
TGCTCGTATTAAAGAGCGTCTTGGTAATTAG

Protein sequence :
MSNIIKQIEQEQLKQNVPSFRPGDTLEVKVWVVEGSKRRLQAFEGVVIAIRHRGLHSAFTLRKISNGVGVERVFQTHSPI
IDSITVKRKGAVRKAKLYYLRERSGKSARIKERLGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 2e-39 89
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 2e-23 60